C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381458 TGM3-001 ENSG00000125780 9606 + 20:2296001-2341078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381458 0.207±0.00 0.008±0.00 0.021±0.00 0.080±0.00 0.018±0.00 0.129±0.09 0.007±0.00 0.034±0.00 0.095±0.00 0.213±0.00 0.007±0.00 11.176±14.88 0.045±0.00 2.102±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FR CIL_0000FR_0001 CGP 20:2101611-2341078
CIL_0000FU CIL_0000FU_0001 CGP 20:2296001-2432753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IDA:IEA protein-glutamine gamma-glutamyltransferase activity
GO:0003824 IDA catalytic activity
GO:0005509 IDA calcium ion binding
GO:0005737 IDA cytoplasm
GO:0006464 NAS cellular protein modification process
GO:0016746 TAS transferase activity, transferring acyl groups
GO:0018149 IDA:IEA peptide cross-linking
GO:0030216 IEP keratinocyte differentiation
GO:0031069 TAS hair follicle morphogenesis
GO:0031234 IDA extrinsic component of cytoplasmic side of plasma membrane
GO:0031424 IEA keratinization
GO:0043163 IDA cell envelope organization
GO:0051262 IDA protein tetramerization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110299 Tgm3-001 protein_coding Mus_musculus 0 1663

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