C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 105kDa/110kDa protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110498 Hsph1-002 ENSMUSG00000029657 10090 - 5:149617169-149636338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110498 2.721±1.80 5.656±1.47 2.840±0.24 4.391±0.00 1.381±0.35 2.942±1.56 4.112±0.00 3.336±1.71 1.728±0.15 2.465±0.52 12.589±5.80 12.097±8.14 2.618±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004GB CIL_0004GB_0002 CGP 5:149528679-149636376
CIL_0000PA CIL_0000PA_0003 CGP 5:149614287-149762599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0051085 IDA chaperone mediated protein folding requiring cofactor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320027 HSPH1-001 protein_coding Homo_sapiens 0 2314
ENST00000380405 HSPH1-002 protein_coding Homo_sapiens 0 1190
ENST00000435381 HSPH1-004 protein_coding Homo_sapiens 0 342
ENST00000445273 HSPH1-201 protein_coding Homo_sapiens 0 2093
ENST00000602786 HSPH1-003 nonsense_mediated_decay Homo_sapiens 0 2761

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