C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYND domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110634 Zmynd11-002 ENSMUSG00000021156 10090 - 13:9685095-9764956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110634 14.045±3.44 14.196±5.30 12.763±2.45 18.859±5.23 9.958±1.49 7.423±0.96 12.638±2.31 13.683±2.21 4.147±0.75 16.787±1.07 6.561±0.66 15.732±3.16 3.596±1.88 3.436±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002P8 CIL_0002P8_0002 CGP 13:9276528-9765321
CIL_0007OC CIL_0007OC_0002 UCNEbase 13:9668478-9686485

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003714 IMP transcription corepressor activity
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA:IDA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0034243 IMP regulation of transcription elongation from RNA polymerase II promoter
GO:0035064 IDA methylated histone binding
GO:0042393 IPI histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000105768 zmynd11-001 protein_coding Danio_rerio 0 344
ENST00000309776 ZMYND11-201 protein_coding Homo_sapiens 0 2281
ENST00000381584 ZMYND11-001 protein_coding Homo_sapiens 0 2844
ENST00000381591 ZMYND11-003 protein_coding Homo_sapiens 0 3068
ENST00000381604 ZMYND11-202 protein_coding Homo_sapiens 0 1912
ENST00000381607 ZMYND11-203 protein_coding Homo_sapiens 0 2300
ENST00000397955 ZMYND11-008 protein_coding Homo_sapiens 0 481
ENST00000397959 ZMYND11-204 protein_coding Homo_sapiens 0 2137
ENST00000397962 ZMYND11-205 protein_coding Homo_sapiens 0 3066
ENST00000402736 ZMYND11-005 protein_coding Homo_sapiens 0 2137
ENST00000403354 ZMYND11-004 protein_coding Homo_sapiens 0 1275
ENST00000439456 ZMYND11-009 protein_coding Homo_sapiens 0 479
ENST00000473115 ZMYND11-006 processed_transcript Homo_sapiens 0 593
ENST00000488275 ZMYND11-007 retained_intron Homo_sapiens 0 614
ENST00000509513 ZMYND11-002 protein_coding Homo_sapiens 0 2200
ENST00000558098 ZMYND11-010 protein_coding Homo_sapiens 0 2183
ENST00000602682 ZMYND11-011 protein_coding Homo_sapiens 0 1513

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