C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with dual PH domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110865 Adap1-001 ENSMUSG00000056413 10090 - 5:139271876-139325622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110865 15.811±5.27 2.560±0.79 19.621±3.52 17.877±6.19 8.777±2.72 11.075±2.99 0.787±0.25 10.972±2.47 1.185±0.90 3.281±0.95 0.516±0.17 1.371±0.50 4.083±1.89 0.329±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_000186 CIL_000186_0002 CGP 5:139252324-139325622
CIL_000185 CIL_000185_0002 CGP 5:139271876-139345233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005547 IEA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043087 IEA regulation of GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265846 ADAP1-001 protein_coding Homo_sapiens 0 1369
ENST00000435943 ADAP1-005 protein_coding Homo_sapiens 0 492
ENST00000437486 ADAP1-012 protein_coding Homo_sapiens 0 630
ENST00000446141 ADAP1-002 protein_coding Homo_sapiens 0 1112
ENST00000449296 ADAP1-201 protein_coding Homo_sapiens 0 1112
ENST00000453175 ADAP1-014 protein_coding Homo_sapiens 0 614
ENST00000453823 ADAP1-009 protein_coding Homo_sapiens 0 603
ENST00000454383 ADAP1-008 protein_coding Homo_sapiens 0 634
ENST00000457254 COX19-002 nonsense_mediated_decay Homo_sapiens 0 1273
ENST00000463358 ADAP1-007 processed_transcript Homo_sapiens 0 628
ENST00000477906 ADAP1-006 processed_transcript Homo_sapiens 0 575
ENST00000478000 ADAP1-003 retained_intron Homo_sapiens 0 968
ENST00000481406 ADAP1-013 retained_intron Homo_sapiens 0 309
ENST00000488527 ADAP1-011 processed_transcript Homo_sapiens 0 231
ENST00000495809 ADAP1-004 retained_intron Homo_sapiens 0 617
ENST00000539900 ADAP1-202 protein_coding Homo_sapiens 0 1273
ENST00000611167 ADAP1-203 protein_coding Homo_sapiens 0 1273
ENST00000617043 ADAP1-204 protein_coding Homo_sapiens 0 1013

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