C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000186_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000239857-ENSG00000105963 CGP 9606 7:876552-955407
GeneTranscriptPositionBiotype
ENSG00000105963 (ADAP1)
ArfGAP with dual PH domains 1 		ENST00000265846 (ADAP1-001) 897903-954697 protein_coding
ENST00000435943 (ADAP1-005) 904247-955406 protein_coding
ENST00000437486 (ADAP1-012) 899465-920889 protein_coding
ENST00000446141 (ADAP1-002) 897909-927216 protein_coding
ENST00000449296 (ADAP1-201) 897901-927216 protein_coding
ENST00000453175 (ADAP1-014) 898917-905077 protein_coding
ENST00000453823 (ADAP1-009) 900533-927514 protein_coding
ENST00000454383 (ADAP1-008) 900142-935180 protein_coding
ENST00000463358 (ADAP1-007) 904152-945816 processed_transcript
ENST00000477906 (ADAP1-006) 904187-955350 processed_transcript
ENST00000478000 (ADAP1-003) 897910-905616 retained_intron
ENST00000481406 (ADAP1-013) 903957-905138 retained_intron
ENST00000488527 (ADAP1-011) 904247-923338 processed_transcript
ENST00000495686 (ADAP1-010) 919968-927055 retained_intron
ENST00000495809 (ADAP1-004) 897945-901399 retained_intron
ENST00000539900 (ADAP1-202) 897901-955407 protein_coding
ENST00000611167 (ADAP1-203) 897901-945816 protein_coding
ENST00000617043 (ADAP1-204) 897901-920889 protein_coding
ENSG00000164828 (SUN1)
Sad1 and UNC84 domain containing 1 		ENST00000340926 (SUN1-003) 832501-850767 retained_intron
ENST00000389574 (SUN1-002) 816615-874902 protein_coding
ENST00000401592 (SUN1-005) 832501-874902 protein_coding
ENST00000403868 (SUN1-007) 832503-843818 protein_coding
ENST00000405266 (SUN1-001) 832501-874900 protein_coding
ENST00000413171 (SUN1-004) 832501-874902 retained_intron
ENST00000419312 (SUN1-027) 843341-851481 protein_coding
ENST00000421580 (SUN1-019) 831922-842019 protein_coding
ENST00000424128 (SUN1-017) 816866-838986 protein_coding
ENST00000425407 (SUN1-201) 832505-874920 protein_coding
ENST00000427969 (SUN1-014) 816615-842568 processed_transcript
ENST00000429178 (SUN1-008) 843370-874899 protein_coding
ENST00000433212 (SUN1-012) 848608-874902 protein_coding
ENST00000435699 (SUN1-013) 816623-843385 protein_coding
ENST00000439679 (SUN1-016) 816755-842086 protein_coding
ENST00000440380 (SUN1-015) 816643-838986 protein_coding
ENST00000450538 (SUN1-021) 816615-843006 processed_transcript
ENST00000450881 (SUN1-024) 838796-852651 protein_coding
ENST00000452783 (SUN1-202) 816615-874920 protein_coding
ENST00000457378 (SUN1-203) 816615-843872 protein_coding
ENST00000457598 (SUN1-018) 830930-842035 protein_coding
ENST00000457861 (SUN1-033) 851950-896435 nonsense_mediated_decay
ENST00000459810 (SUN1-032) 852192-852902 retained_intron
ENST00000463848 (SUN1-031) 851550-852773 retained_intron
ENST00000464442 (SUN1-028) 849801-852907 retained_intron
ENST00000467483 (SUN1-022) 832505-843834 retained_intron
ENST00000469755 (SUN1-020) 832955-842073 processed_transcript
ENST00000471349 (SUN1-026) 842921-848494 retained_intron
ENST00000475971 (SUN1-010) 852247-874902 retained_intron
ENST00000477950 (SUN1-034) 841912-843669 retained_intron
ENST00000480475 (SUN1-029) 849817-852878 retained_intron
ENST00000483996 (SUN1-023) 832507-839180 retained_intron
ENST00000488628 (SUN1-030) 851167-852824 retained_intron
ENST00000493681 (SUN1-025) 841816-848421 retained_intron
ENST00000497943 (SUN1-011) 868474-874902 retained_intron
ENSG00000239857 (GET4)
golgi to ER traffic protein 4 homolog (S. cerevisiae) 		ENST00000265857 (GET4-001) 876552-896434 protein_coding
ENST00000407192 (GET4-002) 883543-896436 protein_coding
ENST00000412734 (GET4-006) 877905-891066 protein_coding
ENST00000426056 (GET4-004) 887033-891054 protein_coding
ENST00000441491 (GET4-003) 884024-887519 protein_coding
ENST00000464468 (GET4-005) 892300-895658 retained_intron
ENST00000483469 (GET4-007) 887486-892474 retained_intron
ENSG00000240230 (COX19)
cytochrome c oxidase assembly homolog 19 (S. cerevisiae) 		ENST00000344111 (COX19-001) 966075-975599 protein_coding
ENST00000457254 (COX19-002) 898778-975549 nonsense_mediated_decay
ENST00000466146 (COX19-003) 972701-975549 retained_intron
ENST00000466853 (COX19-004) 972942-975116 retained_intron
ENSG00000273151 (RP11-449P15.2)
 ENST00000609998 (RP11-449P15.2-001) 879790-886547 antisense
CIL_000186_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025858-ENSMUSG00000056413 CGP 10090 5:139252324-139325622
GeneTranscriptPositionBiotype
ENSMUSG00000025858 (Get4)
golgi to ER traffic protein 4 homolog (S. cerevisiae) 		ENSMUST00000026976 (Get4-001) 139252324-139270051 protein_coding
ENSMUST00000110878 (Get4-002) 139253511-139269329 protein_coding
ENSMUST00000124420 (Get4-006) 139266931-139269702 retained_intron
ENSMUST00000130326 (Get4-003) 139252370-139267141 protein_coding
ENSMUST00000138059 (Get4-005) 139266867-139267438 retained_intron
ENSMUST00000138508 (Get4-004) 139253497-139267234 protein_coding
ENSMUSG00000056413 (Adap1)
ArfGAP with dual PH domains 1 		ENSMUST00000110865 (Adap1-001) 139271876-139325622 protein_coding
ENSMUST00000123748 (Adap1-005) 139272930-139274641 retained_intron
ENSMUST00000126762 (Adap1-002) 139272858-139306291 processed_transcript
ENSMUST00000151450 (Adap1-003) 139271876-139306319 processed_transcript
ENSMUST00000156815 (Adap1-004) 139280522-139307809 retained_intron
ENSMUSG00000098690 (Gm27316)
predicted gene, 27316 		ENSMUST00000184884 (Gm27316-201) 139312424-139312700 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105963 ENST00000265846 1.258±0.00 N/A N/A 25.408±22.64 N/A 9.498±0.00 2.580±0.00 8.410±0.00 N/A 0.194±0.00 N/A N/A 2.161±0.00 N/A
ENST00000435943 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A N/A N/A
ENST00000437486 N/A N/A N/A 6.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.375±0.00 N/A
ENST00000449296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453175 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A N/A N/A
ENST00000453823 N/A N/A N/A 33.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454383 N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463358 N/A N/A N/A 10.792±0.00 N/A 8.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478000 1.606±0.00 2.789±0.00 1.369±0.00 4.701±0.00 3.717±0.00 2.458±0.00 N/A N/A N/A N/A N/A 3.387±0.00 N/A 2.111±0.00
ENST00000481406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495809 N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611167 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.969±0.00 N/A 3.315±0.00 3.208±1.68 N/A
ENST00000617043 N/A N/A N/A N/A 1.050±0.00 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000164828 ENST00000340926 N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 N/A N/A N/A N/A N/A
ENST00000389574 N/A N/A N/A N/A N/A N/A N/A 6.203±0.00 N/A N/A N/A N/A N/A 21.253±14.55
ENST00000401592 N/A N/A 3.101±0.00 4.972±2.35 N/A N/A 8.780±0.00 N/A N/A 5.449±1.32 5.663±0.00 9.681±2.71 7.810±0.95 N/A
ENST00000403868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405266 11.881±0.00 N/A N/A 3.304±0.00 7.722±0.00 4.491±0.00 N/A N/A N/A 6.703±0.00 10.452±0.11 N/A N/A N/A
ENST00000413171 N/A 5.609±0.00 1.653±0.00 N/A 6.688±0.00 N/A N/A 4.078±0.00 N/A N/A N/A 8.339±0.00 N/A N/A
ENST00000419312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429178 8.155±0.00 N/A N/A N/A 4.960±0.00 4.107±0.79 12.543±0.00 5.735±0.00 3.484±1.48 4.575±0.00 8.413±0.00 14.401±5.44 7.044±1.64 6.074±0.00
ENST00000433212 7.324±0.00 11.750±0.00 N/A 5.781±0.00 14.407±0.00 12.300±0.00 N/A 11.505±0.00 2.082±0.00 7.741±0.00 N/A 18.963±2.76 9.899±2.75 10.406±0.00
ENST00000435699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452783 N/A N/A N/A N/A N/A 5.653±0.00 6.017±0.00 N/A N/A 7.372±0.00 6.220±0.00 N/A N/A 7.188±0.00
ENST00000457378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.189±0.00
ENST00000459810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475971 N/A N/A 1.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239857 ENST00000265857 N/A 21.701±0.00 3.209±0.00 17.130±11.53 N/A 18.314±0.00 N/A 17.895±12.96 16.070±0.00 N/A 15.421±0.00 46.558±16.31 34.149±7.35 42.271±7.41
ENST00000407192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240230 ENST00000344111 1.204±0.00 2.090±0.00 N/A 3.517±0.00 0.774±0.10 1.340±0.27 0.754±0.66 1.425±1.10 0.714±0.36 0.962±0.00 0.485±0.05 4.530±3.74 2.809±1.74 3.509±1.47
ENST00000457254 N/A N/A 0.707±0.00 3.281±0.00 2.156±0.00 N/A N/A N/A 0.563±0.00 N/A N/A 7.955±6.51 5.849±0.00 N/A
ENST00000466146 N/A N/A 1.420±0.00 N/A N/A N/A 0.682±0.00 N/A 1.790±0.00 1.271±0.00 1.301±0.00 N/A N/A N/A
ENST00000466853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273151 ENST00000609998 N/A N/A 0.677±0.00 N/A N/A N/A N/A 1.083±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025858 ENSMUST00000026976 23.832±3.42 43.930±6.64 32.646±5.46 21.109±11.09 20.063±7.22 20.581±2.95 17.874±2.15 22.152±1.58 17.143±9.34 29.436±2.24 12.124±1.33 36.033±15.95 17.150±9.27 18.668±8.85
ENSMUST00000110878 7.014±0.00 30.887±0.00 N/A N/A N/A 14.367±1.29 N/A N/A 16.453±10.53 N/A 9.316±1.69 9.104±2.39 28.710±15.84 20.075±7.63
ENSMUST00000124420 10.152±2.43 N/A 16.166±2.07 11.829±1.17 11.887±0.95 14.980±1.06 5.788±0.00 N/A 7.278±2.58 15.174±3.39 N/A 23.125±0.98 N/A 1.944±0.00
ENSMUST00000130326 33.801±15.71 199.387±45.35 N/A N/A 34.645±15.80 55.714±13.73 11.264±0.43 28.581±4.23 19.741±3.53 37.701±20.88 N/A 148.938±44.23 27.855±2.87 50.998±9.53
ENSMUST00000138059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.747±2.59 N/A N/A
ENSMUSG00000056413 ENSMUST00000110865 15.811±5.27 2.560±0.79 19.621±3.52 17.877±6.19 8.777±2.72 11.075±2.99 0.787±0.25 10.972±2.47 1.185±0.90 3.281±0.95 0.516±0.17 1.371±0.50 4.083±1.89 0.329±0.00
ENSMUST00000123748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.502±0.00 1.541±0.34 N/A N/A
ENSMUST00000126762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.407±0.00
ENSMUST00000151450 N/A 0.766±0.17 3.387±0.00 29.491±0.00 7.829±0.00 10.940±2.53 N/A 5.091±3.27 0.525±0.40 1.823±0.48 0.534±0.19 1.319±0.60 5.377±1.64 0.542±0.04
ENSMUST00000156815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.685±0.00 0.919±0.00
ENSMUSG00000098690 ENSMUST00000184884 0.329±0.00 N/A 0.568±0.19 1.320±0.06 N/A N/A N/A N/A 0.556±0.40 0.326±0.00 N/A 0.457±0.00 1.269±1.21 N/A

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