C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000185_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105963-ENSG00000240230 CGP 9606 7:897901-975599
GeneTranscriptPositionBiotype
ENSG00000105963 (ADAP1)
ArfGAP with dual PH domains 1 		ENST00000265846 (ADAP1-001) 897903-954697 protein_coding
ENST00000435943 (ADAP1-005) 904247-955406 protein_coding
ENST00000437486 (ADAP1-012) 899465-920889 protein_coding
ENST00000446141 (ADAP1-002) 897909-927216 protein_coding
ENST00000449296 (ADAP1-201) 897901-927216 protein_coding
ENST00000453175 (ADAP1-014) 898917-905077 protein_coding
ENST00000453823 (ADAP1-009) 900533-927514 protein_coding
ENST00000454383 (ADAP1-008) 900142-935180 protein_coding
ENST00000463358 (ADAP1-007) 904152-945816 processed_transcript
ENST00000477906 (ADAP1-006) 904187-955350 processed_transcript
ENST00000478000 (ADAP1-003) 897910-905616 retained_intron
ENST00000481406 (ADAP1-013) 903957-905138 retained_intron
ENST00000488527 (ADAP1-011) 904247-923338 processed_transcript
ENST00000495686 (ADAP1-010) 919968-927055 retained_intron
ENST00000495809 (ADAP1-004) 897945-901399 retained_intron
ENST00000539900 (ADAP1-202) 897901-955407 protein_coding
ENST00000611167 (ADAP1-203) 897901-945816 protein_coding
ENST00000617043 (ADAP1-204) 897901-920889 protein_coding
ENSG00000240230 (COX19)
cytochrome c oxidase assembly homolog 19 (S. cerevisiae) 		ENST00000344111 (COX19-001) 966075-975599 protein_coding
ENST00000457254 (COX19-002) 898778-975549 nonsense_mediated_decay
ENST00000466146 (COX19-003) 972701-975549 retained_intron
ENST00000466853 (COX19-004) 972942-975116 retained_intron
CIL_000185_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056413-ENSMUSG00000045438 CGP 10090 5:139271876-139345233
GeneTranscriptPositionBiotype
ENSMUSG00000045438 (Cox19)
cytochrome c oxidase assembly protein 19 		ENSMUST00000049630 (Cox19-001) 139336189-139345233 protein_coding
ENSMUST00000133951 (Cox19-004) 139338310-139345125 nonsense_mediated_decay
ENSMUST00000145125 (Cox19-005) 139338140-139339575 processed_transcript
ENSMUST00000148000 (Cox19-002) 139342185-139345165 retained_intron
ENSMUST00000152715 (Cox19-003) 139342016-139345160 retained_intron
ENSMUSG00000056413 (Adap1)
ArfGAP with dual PH domains 1 		ENSMUST00000110865 (Adap1-001) 139271876-139325622 protein_coding
ENSMUST00000123748 (Adap1-005) 139272930-139274641 retained_intron
ENSMUST00000126762 (Adap1-002) 139272858-139306291 processed_transcript
ENSMUST00000151450 (Adap1-003) 139271876-139306319 processed_transcript
ENSMUST00000156815 (Adap1-004) 139280522-139307809 retained_intron
ENSMUSG00000098690 (Gm27316)
predicted gene, 27316 		ENSMUST00000184884 (Gm27316-201) 139312424-139312700 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000185_0001ENSG00000105963ENST00000265846ENST00000435943ENST00000437486ENST00000446141ENST00000449296ENST00000453175ENST00000453823ENST00000454383ENST00000463358ENST00000477906ENST00000478000ENST00000481406ENST00000488527ENST00000495686ENST00000495809ENST00000539900ENST00000611167ENST00000617043ENSG00000240230ENST00000344111ENST00000457254ENST00000466146ENST00000466853CIL_000185_0002ENSMUSG00000045438ENSMUST00000049630ENSMUST00000133951ENSMUST00000145125ENSMUST00000148000ENSMUST00000152715ENSMUSG00000056413ENSMUST00000110865ENSMUST00000123748ENSMUST00000126762ENSMUST00000151450ENSMUST00000156815ENSMUSG00000098690ENSMUST00000184884
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000185_0001ENSG00000105963ENST00000265846ENST00000435943ENST00000437486ENST00000446141ENST00000453175ENST00000453823ENST00000454383ENST00000463358ENST00000478000ENST00000495809ENST00000611167ENST00000617043ENSG00000240230ENST00000344111ENST00000457254ENST00000466146CIL_000185_0002ENSMUSG00000045438ENSMUST00000049630ENSMUST00000133951ENSMUST00000148000ENSMUST00000152715ENSMUSG00000056413ENSMUST00000110865ENSMUST00000123748ENSMUST00000126762ENSMUST00000151450ENSMUST00000156815ENSMUSG00000098690ENSMUST00000184884
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105963 ENST00000265846 1.258±0.00 N/A N/A 25.408±22.64 N/A 9.498±0.00 2.580±0.00 8.410±0.00 N/A 0.194±0.00 N/A N/A 2.161±0.00 N/A
ENST00000435943 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 N/A N/A N/A N/A
ENST00000437486 N/A N/A N/A 6.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.375±0.00 N/A
ENST00000449296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453175 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A N/A N/A
ENST00000453823 N/A N/A N/A 33.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454383 N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463358 N/A N/A N/A 10.792±0.00 N/A 8.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478000 1.606±0.00 2.789±0.00 1.369±0.00 4.701±0.00 3.717±0.00 2.458±0.00 N/A N/A N/A N/A N/A 3.387±0.00 N/A 2.111±0.00
ENST00000481406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495809 N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611167 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.969±0.00 N/A 3.315±0.00 3.208±1.68 N/A
ENST00000617043 N/A N/A N/A N/A 1.050±0.00 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000240230 ENST00000344111 1.204±0.00 2.090±0.00 N/A 3.517±0.00 0.774±0.10 1.340±0.27 0.754±0.66 1.425±1.10 0.714±0.36 0.962±0.00 0.485±0.05 4.530±3.74 2.809±1.74 3.509±1.47
ENST00000457254 N/A N/A 0.707±0.00 3.281±0.00 2.156±0.00 N/A N/A N/A 0.563±0.00 N/A N/A 7.955±6.51 5.849±0.00 N/A
ENST00000466146 N/A N/A 1.420±0.00 N/A N/A N/A 0.682±0.00 N/A 1.790±0.00 1.271±0.00 1.301±0.00 N/A N/A N/A
ENST00000466853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045438 ENSMUST00000049630 10.342±2.32 15.479±3.38 3.396±0.10 13.025±6.83 12.823±4.64 5.652±2.98 11.886±1.61 11.133±1.14 6.128±2.34 5.657±1.00 4.106±1.25 6.188±2.51 3.732±1.20 3.596±1.50
ENSMUST00000133951 N/A N/A N/A 28.618±0.00 N/A N/A N/A N/A N/A N/A N/A 23.419±0.00 17.906±0.57 8.013±0.00
ENSMUST00000145125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.670±0.00 N/A N/A
ENSMUST00000152715 N/A N/A 4.475±0.00 N/A N/A N/A N/A N/A N/A N/A 5.329±0.94 5.815±0.87 N/A N/A
ENSMUSG00000056413 ENSMUST00000110865 15.811±5.27 2.560±0.79 19.621±3.52 17.877±6.19 8.777±2.72 11.075±2.99 0.787±0.25 10.972±2.47 1.185±0.90 3.281±0.95 0.516±0.17 1.371±0.50 4.083±1.89 0.329±0.00
ENSMUST00000123748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.502±0.00 1.541±0.34 N/A N/A
ENSMUST00000126762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.407±0.00
ENSMUST00000151450 N/A 0.766±0.17 3.387±0.00 29.491±0.00 7.829±0.00 10.940±2.53 N/A 5.091±3.27 0.525±0.40 1.823±0.48 0.534±0.19 1.319±0.60 5.377±1.64 0.542±0.04
ENSMUST00000156815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.685±0.00 0.919±0.00
ENSMUSG00000098690 ENSMUST00000184884 0.329±0.00 N/A 0.568±0.19 1.320±0.06 N/A N/A N/A N/A 0.556±0.40 0.326±0.00 N/A 0.457±0.00 1.269±1.21 N/A

Loading