C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110947 Arhgap11a-003 ENSMUSG00000041219 10090 - 2:113833261-113848297 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartMuscleTestisENSMUST00000110947
Transcript ID Adipose Adrenal Breast Colon Heart Muscle Testis
ENSMUST00000110947 0.200±0.11 0.363±0.00 0.481±0.10 0.852±0.56 0.151±0.00 0.077±0.00 0.512±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0002 VISTA 2:113391542-113992644
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361627 ARHGAP11A-001 protein_coding Homo_sapiens 0 1472
ENST00000428041 ARHGAP11B-001 protein_coding Homo_sapiens 0 725
ENST00000543522 ARHGAP11A-005 protein_coding Homo_sapiens 0 1288
ENST00000563110 ARHGAP11B-003 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000563864 ARHGAP11A-004 protein_coding Homo_sapiens 0 1214
ENST00000564902 ARHGAP11B-004 processed_transcript Homo_sapiens 0 556
ENST00000565905 ARHGAP11A-002 protein_coding Homo_sapiens 0 1291
ENST00000566362 ARHGAP11B-009 processed_transcript Homo_sapiens 0 532
ENST00000567348 ARHGAP11A-003 protein_coding Homo_sapiens 0 1530
ENST00000568574 ARHGAP11B-002 retained_intron Homo_sapiens 0 283
ENST00000611363 ARHGAP11A-201 protein_coding Homo_sapiens 0 1288
ENST00000619401 ARHGAP11A-202 protein_coding Homo_sapiens 0 1472
ENST00000621228 ARHGAP11B-202 protein_coding Homo_sapiens 0 725
ENST00000622253 ARHGAP11A-203 protein_coding Homo_sapiens 0 1291
ENST00000622744 ARHGAP11B-201 protein_coding Homo_sapiens 0 725

Loading