C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 11A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041219 Arhgap11a 10090 - 2:113831492-113848661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102545 Arhgap11a-001 113831546-113848656 protein_coding
  ENSMUST00000110947 Arhgap11a-003 113833261-113848297 protein_coding
  ENSMUST00000110948 Arhgap11a-002 113831492-113848661 protein_coding
  ENSMUST00000110949 Arhgap11a-201 113831495-113848615 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102545ENSMUST00000110947ENSMUST00000110948ENSMUST00000110949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102545 0.705±0.23 N/A 0.480±0.02 2.830±1.95 0.307±0.00 N/A N/A N/A 9.056±3.32 0.433±0.05 0.141±0.04 1.984±0.39 0.325±0.00 0.622±0.01
ENSMUST00000110947 0.200±0.11 0.363±0.00 N/A N/A 0.481±0.10 0.852±0.56 0.151±0.00 N/A N/A N/A 0.077±0.00 N/A N/A 0.512±0.05
ENSMUST00000110948 0.181±0.11 0.184±0.10 0.241±0.05 1.666±0.05 0.383±0.19 0.498±0.19 0.111±0.08 0.261±0.11 1.863±1.66 0.381±0.04 0.070±0.00 1.960±0.69 1.942±1.08 0.551±0.15
ENSMUST00000110949 N/A 0.235±0.08 0.351±0.03 0.775±0.53 0.444±0.15 1.060±0.42 0.080±0.03 0.253±0.11 2.754±0.90 N/A 0.195±0.05 1.552±0.86 3.584±3.84 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0002 VISTA 2:113391542-113992644
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015403 arhgap11a Rho GTPase activating protein 11A protein_coding Danio_rerio
ENSG00000198826 ARHGAP11A Rho GTPase activating protein 11A protein_coding Homo_sapiens

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