C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110948 Arhgap11a-002 ENSMUSG00000041219 10090 - 2:113831492-113848661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110948 0.181±0.11 0.184±0.10 0.241±0.05 1.666±0.05 0.383±0.19 0.498±0.19 0.111±0.08 0.261±0.11 1.863±1.66 0.381±0.04 0.070±0.00 1.960±0.69 1.942±1.08 0.551±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0002 VISTA 2:113391542-113992644
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361627 ARHGAP11A-001 protein_coding Homo_sapiens 0 1356
ENST00000428041 ARHGAP11B-001 protein_coding Homo_sapiens 0 725
ENST00000543522 ARHGAP11A-005 protein_coding Homo_sapiens 0 1173
ENST00000563110 ARHGAP11B-003 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000563864 ARHGAP11A-004 protein_coding Homo_sapiens 0 1214
ENST00000564902 ARHGAP11B-004 processed_transcript Homo_sapiens 0 556
ENST00000565905 ARHGAP11A-002 protein_coding Homo_sapiens 0 1177
ENST00000566362 ARHGAP11B-009 processed_transcript Homo_sapiens 0 532
ENST00000567348 ARHGAP11A-003 protein_coding Homo_sapiens 0 1356
ENST00000568574 ARHGAP11B-002 retained_intron Homo_sapiens 0 283
ENST00000611363 ARHGAP11A-201 protein_coding Homo_sapiens 0 1173
ENST00000619401 ARHGAP11A-202 protein_coding Homo_sapiens 0 1356
ENST00000621228 ARHGAP11B-202 protein_coding Homo_sapiens 0 725
ENST00000622253 ARHGAP11A-203 protein_coding Homo_sapiens 0 1177
ENST00000622744 ARHGAP11B-201 protein_coding Homo_sapiens 0 725

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