C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111234 Tnfrsf19-201 ENSMUSG00000060548 10090 - 14:60963834-61046855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111234 4.934±4.63 9.399±2.05 9.066±0.39 4.572±1.56 1.325±0.81 0.879±0.17 0.858±0.08 0.631±0.17 0.848±0.24 13.363±3.05 1.489±0.51 4.313±1.97 0.358±0.27 0.210±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0002 VISTA 14:60704739-61305741
CIL_0008P8 CIL_0008P8_0002 VISTA 14:60705067-61305254
CIL_0006IM CIL_0006IM_0002 CGP 14:60784566-61046855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IGI hair follicle development
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248484 TNFRSF19-004 protein_coding Homo_sapiens 0 939
ENST00000382258 TNFRSF19-001 protein_coding Homo_sapiens 0 846
ENST00000382263 TNFRSF19-002 protein_coding Homo_sapiens 0 846
ENST00000403372 TNFRSF19-201 protein_coding Homo_sapiens 0 739

Loading