C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111236 Tnfrsf19-202 ENSMUSG00000060548 10090 - 14:60963834-61037987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111236 2.721±0.00 25.338±5.53 6.214±0.57 5.606±0.17 0.888±0.19 1.106±0.50 0.354±0.10 0.211±0.07 0.599±0.22 4.735±1.85 0.896±0.27 7.415±2.22 0.566±0.39 0.100±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0002 VISTA 14:60704739-61305741
CIL_0008P8 CIL_0008P8_0002 VISTA 14:60705067-61305254
CIL_0006IM CIL_0006IM_0002 CGP 14:60784566-61046855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IGI hair follicle development
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248484 TNFRSF19-004 protein_coding Homo_sapiens 0 846
ENST00000382258 TNFRSF19-001 protein_coding Homo_sapiens 0 846
ENST00000382263 TNFRSF19-002 protein_coding Homo_sapiens 0 846
ENST00000403372 TNFRSF19-201 protein_coding Homo_sapiens 0 739

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