C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111306 Usp21-002 ENSMUSG00000053483 10090 - 1:171281958-171287961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonTestisENSMUST00000111306
Transcript ID Adrenal Colon Testis
ENSMUST00000111306 8.228±0.00 3.926±0.00 1.665±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005634 IC nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 ISS cysteine-type peptidase activity
GO:0016578 IDA histone deubiquitination
GO:0019784 ISS NEDD8-specific protease activity
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289865 USP21-001 protein_coding Homo_sapiens 0 2844
ENST00000368001 USP21-002 protein_coding Homo_sapiens 0 2255
ENST00000368002 USP21-201 protein_coding Homo_sapiens 0 2610
ENST00000401725 AC019109.1-001 processed_pseudogene Homo_sapiens 0 800
ENST00000479344 USP21-005 protein_coding Homo_sapiens 0 503
ENST00000482385 USP21-008 retained_intron Homo_sapiens 0 501
ENST00000485277 USP21-009 retained_intron Homo_sapiens 0 499
ENST00000486299 USP21-006 processed_transcript Homo_sapiens 0 484
ENST00000487163 USP21-003 retained_intron Homo_sapiens 0 828
ENST00000492950 USP21-004 protein_coding Homo_sapiens 0 1046
ENST00000493054 USP21-007 processed_transcript Homo_sapiens 0 861

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