C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401725 AC019109.1-001 ENSG00000224826 9606 + 2:224169664-224171537 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000401725
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000401725 0.023±0.00 0.032±0.00 0.051±0.00 0.103±0.00 0.036±0.00 0.007±0.00 0.039±0.00 0.028±0.00 0.007±0.00 0.007±0.00 0.052±0.04 0.176±0.00 0.167±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XO CIL_0006XO_0001 CGP 2:223975112-224402085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111306 Usp21-002 protein_coding Mus_musculus 0 800
ENSMUST00000111305 Usp21-004 protein_coding Mus_musculus 0 800
ENSMUST00000065941 Usp21-001 protein_coding Mus_musculus 0 800
ENSMUST00000149187 Usp21-003 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000126729 Usp21-009 retained_intron Mus_musculus 0 291
ENSMUST00000189556 St8sia4-004 protein_coding Mus_musculus 0.000000000000003 88
ENSMUST00000093906 Birc5-002 protein_coding Mus_musculus 0.0000000000006 81
ENSMUST00000156046 Znhit3-002 retained_intron Mus_musculus 0.00000000003 75
ENSMUST00000135387 Trim24-008 retained_intron Mus_musculus 0.00000000009 73
ENSMUST00000162226 Zbtb37-001 protein_coding Mus_musculus 0.00000000009 73
ENSMUST00000175682 Kdm2a-003 retained_intron Mus_musculus 0.0000000003 71
ENSMUST00000108055 Kif24-001 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000102975 Mob3b-001 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000146467 Ubxn6-005 retained_intron Mus_musculus 0.000000004 68
ENSMUST00000151943 Ubxn6-002 retained_intron Mus_musculus 0.000000004 68
ENSMUST00000132804 Ubxn6-003 retained_intron Mus_musculus 0.000000004 68
ENSMUST00000159758 Osbpl9-016 retained_intron Mus_musculus 0.000000004 68
ENSMUST00000114937 Usp6nl-001 protein_coding Mus_musculus 0.000000004 68
ENSMUST00000086274 Gm10490-201 protein_coding Mus_musculus 0.00000002 66

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