C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 6, cardiac muscle, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111456 Myh6-002 ENSMUSG00000040752 10090 - 14:54965270-54966927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000111456
Transcript ID Colon
ENSMUST00000111456 0.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830
CIL_00051L CIL_00051L_0002 CGP 14:54936470-54966927
CIL_0004Z7 CIL_0004Z7_0008 CGP 14:54941921-54994634

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IMP microfilament motor activity
GO:0001701 IMP in utero embryonic development
GO:0001725 IDA stress fiber
GO:0002026 IMP regulation of the force of heart contraction
GO:0002027 IMP regulation of heart rate
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006941 IMP striated muscle contraction
GO:0007512 IMP adult heart development
GO:0007522 IMP visceral muscle development
GO:0008016 IMP regulation of heart contraction
GO:0008217 IMP regulation of blood pressure
GO:0016459 IDA myosin complex
GO:0030016 IDA myofibril
GO:0030018 IDA Z disc
GO:0030048 IMP actin filament-based movement
GO:0030239 IMP myofibril assembly
GO:0030509 IDA BMP signaling pathway
GO:0043462 IMP regulation of ATPase activity
GO:0045214 IMP sarcomere organization
GO:0048739 IMP cardiac muscle fiber development
GO:0051015 IEA actin filament binding
GO:0060070 IDA canonical Wnt signaling pathway
GO:0060420 IDA regulation of heart growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 226
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 231
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 235

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