| Transcript ID | Adrenal | Breast | Colon | Ovary |
|---|---|---|---|---|
| ENSMUST00000111524 | 8.243±1.19 | 23.890±5.32 | 10.406±1.89 | 10.950±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | actin-binding LIM protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000111524  |
Ablim1-006 |
ENSMUSG00000025085 |
10090 | - |
19:57130606-57314911  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002OJ | CIL_0002OJ_0002 | CGP | 19:56912361-57314919 |
| CIL_0001R6 | CIL_0001R6_0003 | CGP | 19:57032733-57389594 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001725 | ISO | stress fiber |
| GO:0003779 | IDA | actin binding |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0007010 | IEA | cytoskeleton organization |
| GO:0007411 | IDA | axon guidance |
| GO:0008270 | IEA | zinc ion binding |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030027 | ISO | lamellipodium |
| GO:0030032 | ISO | lamellipodium assembly |
| GO:0042384 | ISO | cilium assembly |
| GO:0045944 | IMP | positive regulation of transcription from RNA polymerase II promoter |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000277895
|
ABLIM1-001 | protein_coding | Homo_sapiens | 0 | 813 |
|
ENST00000369252
|
ABLIM1-201 | protein_coding | Homo_sapiens | 0 | 815 |
|
ENST00000369256
|
ABLIM1-005 | protein_coding | Homo_sapiens | 0 | 815 |
|
ENST00000392955
|
ABLIM1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 815 |
|
ENST00000481974
|
ABLIM1-006 | retained_intron | Homo_sapiens | 0 | 451 |
|
ENST00000533213
|
ABLIM1-203 | protein_coding | Homo_sapiens | 0 | 815 |
