C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111557 Dennd5b-001 ENSMUSG00000030313 10090 - 6:148988071-149101680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111557 0.877±0.14 0.461±0.10 0.663±0.06 3.784±0.73 0.707±0.20 0.533±0.17 0.652±0.33 1.300±0.49 3.136±1.63 1.298±0.32 0.351±0.20 0.785±0.25 1.292±0.88 0.967±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DK CIL_0003DK_0003 CGP 6:148921035-149101680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IBA membrane
GO:0016021 IEA integral component of membrane
GO:0017112 IBA:ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 IBA:ISS positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354285 DENND5B-002 protein_coding Homo_sapiens 0 2660
ENST00000389082 DENND5B-001 protein_coding Homo_sapiens 0 5583
ENST00000536562 DENND5B-003 protein_coding Homo_sapiens 0 5035
ENST00000537061 DENND5B-008 retained_intron Homo_sapiens 0 340
ENST00000544698 DENND5B-006 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000545147 DENND5B-007 processed_transcript Homo_sapiens 0 379
ENST00000546299 DENND5B-004 protein_coding Homo_sapiens 0 1958

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