C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | actin-binding LIM protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000111559  |
Ablim1-008 |
ENSMUSG00000025085 |
10090 | - |
19:57036283-57239329  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002OJ | CIL_0002OJ_0002 | CGP | 19:56912361-57314919 |
| CIL_0001R6 | CIL_0001R6_0003 | CGP | 19:57032733-57389594 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001725 | ISO | stress fiber |
| GO:0003779 | IDA | actin binding |
| GO:0007010 | IEA | cytoskeleton organization |
| GO:0007411 | IDA | axon guidance |
| GO:0008270 | IEA | zinc ion binding |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0030027 | ISO | lamellipodium |
| GO:0030032 | ISO | lamellipodium assembly |
| GO:0042384 | ISO | cilium assembly |
| GO:0045944 | IMP | positive regulation of transcription from RNA polymerase II promoter |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000277895
|
ABLIM1-001 | protein_coding | Homo_sapiens | 0 | 2747 |
|
ENST00000369252
|
ABLIM1-201 | protein_coding | Homo_sapiens | 0 | 1781 |
|
ENST00000369253
|
ABLIM1-010 | protein_coding | Homo_sapiens | 0 | 1079 |
|
ENST00000369256
|
ABLIM1-005 | protein_coding | Homo_sapiens | 0 | 1759 |
|
ENST00000369266
|
ABLIM1-202 | protein_coding | Homo_sapiens | 0 | 1074 |
|
ENST00000392952
|
ABLIM1-009 | protein_coding | Homo_sapiens | 0 | 1079 |
|
ENST00000392955
|
ABLIM1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 2739 |
|
ENST00000428430
|
ABLIM1-011 | protein_coding | Homo_sapiens | 0 | 704 |
|
ENST00000440467
|
ABLIM1-012 | protein_coding | Homo_sapiens | 0 | 562 |
|
ENST00000466400
|
ABLIM1-014 | retained_intron | Homo_sapiens | 0 | 213 |
|
ENST00000481974
|
ABLIM1-006 | retained_intron | Homo_sapiens | 0 | 451 |
|
ENST00000533213
|
ABLIM1-203 | protein_coding | Homo_sapiens | 0 | 2774 |
