C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: BRCA1 associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111765 Brap-004 ENSMUSG00000029458 10090 + 5:121660869-121687245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000111765
Transcript ID Testis
ENSMUST00000111765 21.343±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327551 BRAP-002 protein_coding Homo_sapiens 0 1805
ENST00000419234 BRAP-001 protein_coding Homo_sapiens 0 1803
ENST00000547043 BRAP-003 retained_intron Homo_sapiens 0 1147

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