C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398755 PARP3-001 ENSG00000041880 9606 + 3:51942359-51948862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000398755
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000398755 2.424±0.00 1.099±0.00 2.323±0.64 3.240±2.58 0.801±0.00 1.252±1.11 1.619±0.00 1.885±1.56 0.832±0.00 2.184±1.46 0.620±0.00 2.936±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IMP telomere maintenance
GO:0003824 TAS catalytic activity
GO:0003950 IDA:IEA NAD+ ADP-ribosyltransferase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006281 TAS DNA repair
GO:0006302 IMP double-strand break repair
GO:0006471 IDA:IEA protein ADP-ribosylation
GO:0035861 IDA site of double-strand break
GO:0051106 IGI positive regulation of DNA ligation
GO:0060236 IMP regulation of mitotic spindle organization
GO:1990166 IMP protein localization to site of double-strand break

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123555 Parp3-004 protein_coding Mus_musculus 0 1336
ENSMUST00000067218 Parp3-001 protein_coding Mus_musculus 0 1336
ENSMUST00000112479 Parp3-002 protein_coding Mus_musculus 0 1299
ENSMUST00000145396 Parp3-005 retained_intron Mus_musculus 0 575
ENSMUST00000139362 Parp3-008 retained_intron Mus_musculus 0 294

Loading