C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000054219-ENSG00000153246 CGP 9606 2:159803355-160062610
GeneTranscriptPositionBiotype
ENSG00000054219 (LY75)
lymphocyte antigen 75 		ENST00000263636 (LY75-001) 159803355-159904710 protein_coding
ENST00000471164 (LY75-006) 159902549-159904649 processed_transcript
ENST00000484559 (LY75-004) 159871819-159904742 retained_intron
ENST00000492955 (LY75-007) 159902365-159904749 processed_transcript
ENSG00000153246 (PLA2R1)
phospholipase A2 receptor 1, 180kDa 		ENST00000283243 (PLA2R1-001) 159937851-160062610 protein_coding
ENST00000392771 (PLA2R1-002) 159945815-160062610 protein_coding
ENST00000460710 (PLA2R1-003) 159932006-159945000 processed_transcript
ENSG00000227055 (AC009961.5)
 ENST00000435771 (AC009961.5-001) 159812234-159814009 processed_pseudogene
ENSG00000248672 (LY75-CD302)
LY75-CD302 readthrough 		ENST00000504764 (LY75-CD302-001) 159771851-159904710 protein_coding
ENST00000505052 (LY75-CD302-002) 159771851-159904710 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005TY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026980-ENSMUSG00000054580 CGP 10090 2:60292103-60553308
GeneTranscriptPositionBiotype
ENSMUSG00000026980 (Ly75)
lymphocyte antigen 75 		ENSMUST00000028362 (Ly75-201) 60293760-60383231 protein_coding
ENSMUST00000112533 (Ly75-001) 60292103-60383303 protein_coding
ENSMUSG00000054580 (Pla2r1)
phospholipase A2 receptor 1 		ENSMUST00000067708 (Pla2r1-201) 60417543-60553308 protein_coding
ENSMUST00000112525 (Pla2r1-001) 60417543-60553308 protein_coding
ENSMUST00000126327 (Pla2r1-006) 60420025-60424307 processed_transcript
ENSMUST00000128208 (Pla2r1-002) 60451109-60553308 processed_transcript
ENSMUST00000134583 (Pla2r1-005) 60451992-60455254 processed_transcript
ENSMUST00000136034 (Pla2r1-004) 60440890-60443424 processed_transcript
ENSMUST00000150373 (Pla2r1-003) 60533878-60553308 processed_transcript
ENSMUSG00000086578 (Gm13583)
predicted gene 13583 		ENSMUST00000126361 (Gm13583-002) 60552355-60553274 antisense
ENSMUST00000151931 (Gm13583-001) 60550757-60553923 antisense
ENSMUST00000168789 (Gm13583-201) 60550759-60550881 antisense
ENSMUSG00000087283 (Gm13580)
predicted gene 13580 		ENSMUST00000131457 (Gm13580-001) 60411525-60412579 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TY_0001ENSG00000054219ENST00000263636ENST00000471164ENST00000484559ENST00000492955ENSG00000153246ENST00000283243ENST00000392771ENST00000460710ENSG00000227055ENST00000435771ENSG00000248672ENST00000504764ENST00000505052CIL_0005TY_0002ENSMUSG00000026980ENSMUST00000028362ENSMUST00000112533ENSMUSG00000054580ENSMUST00000067708ENSMUST00000112525ENSMUST00000126327ENSMUST00000128208ENSMUST00000134583ENSMUST00000136034ENSMUST00000150373ENSMUSG00000086578ENSMUST00000126361ENSMUST00000151931ENSMUST00000168789ENSMUSG00000087283ENSMUST00000131457
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TY_0001ENSG00000054219ENST00000263636ENSG00000153246ENST00000283243ENST00000392771ENST00000460710ENSG00000227055ENST00000435771ENSG00000248672ENST00000504764CIL_0005TY_0002ENSMUSG00000026980ENSMUST00000028362ENSMUST00000112533ENSMUSG00000054580ENSMUST00000067708ENSMUST00000128208ENSMUSG00000086578ENSMUST00000126361ENSMUST00000151931ENSMUSG00000087283ENSMUST00000131457
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054219 ENST00000263636 N/A 4.098±0.00 N/A N/A 2.519±0.00 1.816±0.00 N/A N/A N/A 3.110±0.00 N/A 5.147±0.71 N/A N/A
ENST00000471164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153246 ENST00000283243 0.663±0.00 0.615±0.00 2.501±0.00 0.152±0.03 1.406±0.28 0.501±0.00 0.104±0.05 3.753±0.00 0.066±0.00 0.446±0.15 0.065±0.03 0.659±0.11 0.284±0.06 0.410±0.25
ENST00000392771 0.511±0.00 0.324±0.00 1.357±0.00 0.075±0.01 0.812±0.10 0.710±0.09 0.172±0.04 3.505±0.00 2.358±0.00 0.493±0.28 0.151±0.00 1.256±0.63 0.569±0.35 0.305±0.21
ENST00000460710 N/A N/A N/A N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A 4.849±0.00 N/A N/A
ENSG00000227055 ENST00000435771 N/A 0.086±0.00 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248672 ENST00000504764 N/A N/A N/A N/A N/A 2.171±0.00 N/A N/A N/A 5.089±0.00 N/A 5.940±0.00 N/A N/A
ENST00000505052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026980 ENSMUST00000028362 N/A N/A N/A 0.098±0.00 0.585±0.00 N/A N/A N/A N/A N/A N/A 0.264±0.08 N/A 0.141±0.06
ENSMUST00000112533 N/A 0.131±0.02 0.113±0.00 0.179±0.00 N/A 0.299±0.00 N/A 0.212±0.00 0.431±0.21 N/A 0.019±0.01 0.518±0.21 1.134±0.12 0.179±0.01
ENSMUSG00000054580 ENSMUST00000067708 1.361±0.45 0.328±0.12 9.477±1.80 0.086±0.01 0.727±0.26 0.669±0.24 0.212±0.07 1.266±0.20 0.153±0.09 1.653±0.59 0.308±0.10 1.639±0.86 1.136±0.37 0.284±0.12
ENSMUST00000112525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128208 N/A 0.218±0.00 N/A 0.109±0.07 0.516±0.04 N/A 0.231±0.01 N/A 0.123±0.03 N/A 0.180±0.00 0.918±0.33 N/A N/A
ENSMUST00000134583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086578 ENSMUST00000126361 3.484±0.84 0.840±0.31 N/A N/A 2.468±0.61 2.408±0.69 1.238±0.10 3.616±0.83 0.426±0.08 7.040±1.24 N/A 3.214±0.99 N/A 0.639±0.12
ENSMUST00000151931 2.548±0.64 0.303±0.14 N/A N/A 0.886±0.18 0.616±0.00 0.451±0.00 N/A 0.274±0.03 3.140±0.65 N/A 2.421±0.93 N/A 0.300±0.09
ENSMUST00000168789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087283 ENSMUST00000131457 N/A N/A N/A N/A N/A 0.121±0.00 0.176±0.00 N/A 0.164±0.12 1.228±0.59 N/A 0.298±0.18 0.703±0.48 0.068±0.00

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