C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000112634  |
Galnt13-003 |
ENSMUSG00000060988 |
10090 | + |
2:54436387-55118309  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00075A | CIL_00075A_0002 | CGP | 2:54084093-55118309 |
| CIL_00075B | CIL_00075B_0002 | CGP | 2:54436317-55598145 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004653 | IDA | polypeptide N-acetylgalactosaminyltransferase activity |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006493 | IDA | protein O-linked glycosylation |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030246 | IEA | carbohydrate binding |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000392825
|
GALNT13-001 | protein_coding | Homo_sapiens | 0 | 2231 |
|
ENST00000409237
|
GALNT13-005 | protein_coding | Homo_sapiens | 0 | 2028 |
|
ENST00000422126
|
GALNT13-006 | protein_coding | Homo_sapiens | 0 | 490 |
|
ENST00000431076
|
GALNT13-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1594 |
|
ENST00000434213
|
GALNT13-002 | protein_coding | Homo_sapiens | 7e-27 | 124 |
|
ENST00000450838
|
GALNT13-009 | protein_coding | Homo_sapiens | 0 | 521 |
|
ENST00000453715
|
GALNT13-004 | protein_coding | Homo_sapiens | 0 | 364 |
|
ENST00000487047
|
GALNT13-010 | processed_transcript | Homo_sapiens | 0 | 835 |
|
ENST00000489553
|
GALNT13-008 | processed_transcript | Homo_sapiens | 0 | 392 |
|
ENST00000494805
|
GALNT13-007 | retained_intron | Homo_sapiens | 0 | 318 |
