C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060988 Galnt13 10090 + 2:54436317-55118309 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068595 Galnt13-201 54516540-55112961 protein_coding
  ENSMUST00000112634 Galnt13-003 54436387-55118309 protein_coding
  ENSMUST00000112635 Galnt13-002 54436387-55118309 protein_coding
  ENSMUST00000112636 Galnt13-001 54436317-55118309 protein_coding
  ENSMUST00000136642 Galnt13-004 54436491-54733133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068595ENSMUST00000112635ENSMUST00000112636ENSMUST00000136642
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068595 N/A N/A N/A 2.639±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A 0.099±0.09 0.027±0.00 0.079±0.05
ENSMUST00000112635 0.003±0.00 0.028±0.00 N/A 0.684±0.40 0.040±0.03 0.133±0.03 0.004±0.00 0.005±0.00 0.005±0.00 0.200±0.10 0.000±0.00 0.200±0.06 0.005±0.00 0.014±0.02
ENSMUST00000112636 0.002±0.00 0.061±0.03 0.003±0.00 0.399±0.16 0.009±0.00 0.209±0.09 0.005±0.00 0.001±0.00 0.003±0.00 0.426±0.20 0.003±0.00 0.113±0.07 0.010±0.01 0.004±0.00
ENSMUST00000136642 N/A N/A 0.037±0.00 N/A 0.050±0.00 0.103±0.00 N/A N/A N/A 0.593±0.15 N/A 0.207±0.13 N/A 0.033±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075A CIL_00075A_0002 CGP 2:54084093-55118309
CIL_00075B CIL_00075B_0002 CGP 2:54436317-55598145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IDA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006493 IDA protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077128 galnt13 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 protein_coding Danio_rerio
ENSG00000144278 GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 protein_coding Homo_sapiens

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