C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00075A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177519-ENSG00000144278 CGP 9606 2:153477338-154453849
GeneTranscriptPositionBiotype
ENSG00000144278 (GALNT13)
polypeptide N-acetylgalactosaminyltransferase 13 		ENST00000392825 (GALNT13-001) 153871913-154453849 protein_coding
ENST00000409237 (GALNT13-005) 153944498-154451303 protein_coding
ENST00000422126 (GALNT13-006) 154409011-154450793 protein_coding
ENST00000431076 (GALNT13-003) 154140341-154409340 nonsense_mediated_decay
ENST00000434213 (GALNT13-002) 153871953-153944555 protein_coding
ENST00000450838 (GALNT13-009) 154301579-154450730 protein_coding
ENST00000453715 (GALNT13-004) 154438592-154450745 protein_coding
ENST00000487047 (GALNT13-010) 154257567-154438676 processed_transcript
ENST00000489553 (GALNT13-008) 154441721-154450801 processed_transcript
ENST00000494805 (GALNT13-007) 154446478-154450694 retained_intron
ENSG00000177519 (RPRM)
reprimo, TP53 dependent G2 arrest mediator candidate 		ENST00000325926 (RPRM-001) 153477338-153478808 protein_coding
ENSG00000212001 (AC009297.1)
 ENST00000390712 (AC009297.1-201) 154231718-154231829 miRNA
ENSG00000224675 (AC009227.2)
 ENST00000434635 (AC009227.2-001) 154435853-154457438 antisense
ENSG00000227400 (AC012501.2)
 ENST00000424322 (AC012501.2-003) 153421807-153593288 sense_overlapping
ENST00000454312 (AC012501.2-001) 153421616-153449820 sense_overlapping
ENST00000454537 (AC012501.2-002) 153421685-153449818 sense_overlapping
ENSG00000230251 (PHBP4)
prohibitin pseudogene 4 		ENST00000437447 (PHBP4-001) 154286589-154287425 processed_pseudogene
ENSG00000236917 (DNAJA1P2)
DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 2 		ENST00000421360 (DNAJA1P2-001) 153761450-153762646 processed_pseudogene
CIL_00075A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075334-ENSMUSG00000060988 CGP 10090 2:54084093-55118309
GeneTranscriptPositionBiotype
ENSMUSG00000060988 (Galnt13)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 		ENSMUST00000068595 (Galnt13-201) 54516540-55112961 protein_coding
ENSMUST00000112634 (Galnt13-003) 54436387-55118309 protein_coding
ENSMUST00000112635 (Galnt13-002) 54436387-55118309 protein_coding
ENSMUST00000112636 (Galnt13-001) 54436317-55118309 protein_coding
ENSMUST00000136642 (Galnt13-004) 54436491-54733133 protein_coding
ENSMUSG00000064596 (Gm22298)
predicted gene, 22298 		ENSMUST00000082662 (Gm22298-201) 54100430-54100562 snoRNA
ENSMUSG00000075334 (Rprm)
reprimo, TP53 dependent G2 arrest mediator candidate 		ENSMUST00000100089 (Rprm-001) 54084093-54085552 protein_coding
ENSMUSG00000082096 (Gm13505)
predicted gene 13505 		ENSMUST00000121666 (Gm13505-001) 54240569-54241385 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075A_0001ENSG00000144278ENST00000392825ENST00000409237ENST00000422126ENST00000431076ENST00000434213ENST00000450838ENST00000453715ENST00000487047ENST00000489553ENST00000494805ENSG00000177519ENST00000325926ENSG00000212001ENST00000390712ENSG00000224675ENST00000434635ENSG00000227400ENST00000424322ENST00000454312ENST00000454537ENSG00000230251ENST00000437447ENSG00000236917ENST00000421360CIL_00075A_0002ENSMUSG00000060988ENSMUST00000068595ENSMUST00000112634ENSMUST00000112635ENSMUST00000112636ENSMUST00000136642ENSMUSG00000064596ENSMUST00000082662ENSMUSG00000075334ENSMUST00000100089ENSMUSG00000082096ENSMUST00000121666
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075A_0001ENSG00000144278ENST00000392825ENST00000409237ENST00000431076ENST00000450838ENST00000487047ENSG00000177519ENST00000325926ENSG00000212001ENST00000390712ENSG00000224675ENST00000434635ENSG00000227400ENST00000424322ENST00000454312ENST00000454537ENSG00000230251ENST00000437447ENSG00000236917ENST00000421360CIL_00075A_0002ENSMUSG00000060988ENSMUST00000068595ENSMUST00000112635ENSMUST00000112636ENSMUST00000136642ENSMUSG00000064596ENSMUST00000082662ENSMUSG00000075334ENSMUST00000100089ENSMUSG00000082096ENSMUST00000121666
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144278 ENST00000392825 0.232±0.00 0.094±0.00 0.015±0.00 2.672±0.00 0.223±0.00 0.128±0.00 N/A N/A 0.180±0.00 N/A N/A 0.069±0.01 0.121±0.06 0.276±0.00
ENST00000409237 N/A N/A N/A N/A 0.225±0.00 0.096±0.00 0.047±0.00 N/A N/A 0.690±0.00 N/A N/A 0.148±0.00 N/A
ENST00000422126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431076 N/A N/A 0.258±0.00 N/A N/A N/A N/A 0.156±0.00 N/A N/A N/A 0.059±0.04 N/A 0.303±0.00
ENST00000434213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450838 N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000453715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487047 N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177519 ENST00000325926 0.313±0.00 0.246±0.00 0.497±0.00 3.745±1.44 0.214±0.03 3.297±3.20 N/A 1.554±0.00 0.193±0.00 0.605±0.00 N/A 9.231±2.03 0.856±0.44 1.959±1.03
ENSG00000212001 ENST00000390712 N/A 0.817±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224675 ENST00000434635 0.110±0.00 0.189±0.00 0.085±0.00 N/A 0.058±0.00 0.096±0.00 0.040±0.00 0.105±0.00 0.060±0.00 0.096±0.00 0.022±0.00 0.024±0.00 N/A 0.051±0.04
ENSG00000227400 ENST00000424322 N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454312 N/A 0.029±0.00 0.608±0.00 N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A
ENST00000454537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A
ENSG00000230251 ENST00000437447 N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A 0.071±0.02
ENSG00000236917 ENST00000421360 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.007±0.00 0.014±0.01 N/A N/A N/A 0.011±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000060988 ENSMUST00000068595 N/A N/A N/A 2.639±0.00 N/A N/A N/A N/A 0.009±0.00 N/A N/A 0.099±0.09 0.027±0.00 0.079±0.05
ENSMUST00000112634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112635 0.003±0.00 0.028±0.00 N/A 0.684±0.40 0.040±0.03 0.133±0.03 0.004±0.00 0.005±0.00 0.005±0.00 0.200±0.10 0.000±0.00 0.200±0.06 0.005±0.00 0.014±0.02
ENSMUST00000112636 0.002±0.00 0.061±0.03 0.003±0.00 0.399±0.16 0.009±0.00 0.209±0.09 0.005±0.00 0.001±0.00 0.003±0.00 0.426±0.20 0.003±0.00 0.113±0.07 0.010±0.01 0.004±0.00
ENSMUST00000136642 N/A N/A 0.037±0.00 N/A 0.050±0.00 0.103±0.00 N/A N/A N/A 0.593±0.15 N/A 0.207±0.13 N/A 0.033±0.02
ENSMUSG00000064596 ENSMUST00000082662 N/A N/A N/A 12.199±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075334 ENSMUST00000100089 9.247±9.20 0.714±0.18 0.737±0.14 48.721±18.39 0.176±0.05 5.230±0.46 0.156±0.05 0.656±0.26 0.114±0.09 7.126±1.00 0.048±0.02 5.915±2.31 0.674±1.09 0.901±0.60
ENSMUSG00000082096 ENSMUST00000121666 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A 0.529±0.37

Loading