C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol-4-phosphate 5-kinase, type 1 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112673 Pip5k1b-002 ENSMUSG00000024867 10090 - 19:24294794-24555842 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000112673
Transcript ID Adipose Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000112673 0.113±0.00 2.488±0.00 0.183±0.00 0.020±0.00 0.135±0.00 3.230±0.00 1.575±0.57 0.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086N CIL_00086N_0002 VISTA 19:24151986-24754280
CIL_0000F1 CIL_0000F1_0002 CGP 19:24261453-24555872
CIL_0006TQ CIL_0006TQ_0002 CGP 19:24294794-24555872

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0016020 IEA membrane
GO:0016308 IDA 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0046488 IDA phosphatidylinositol metabolic process
GO:0046854 IEA phosphatidylinositol phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000078358 pip5k1aa-001 protein_coding Danio_rerio 0 241
ENST00000265382 PIP5K1B-001 protein_coding Homo_sapiens 0 1502
ENST00000349792 PIP5K1A-001 protein_coding Homo_sapiens 0.000000009 68
ENST00000368888 PIP5K1A-003 protein_coding Homo_sapiens 0.000000005 68
ENST00000368890 PIP5K1A-002 protein_coding Homo_sapiens 0.000000008 68
ENST00000377284 PIP5K1B-004 protein_coding Homo_sapiens 0 433
ENST00000409426 PIP5K1A-015 protein_coding Homo_sapiens 0.000000009 68
ENST00000437200 PIP5K1B-005 protein_coding Homo_sapiens 0 669
ENST00000440050 PIP5K1B-003 protein_coding Homo_sapiens 0 640
ENST00000441902 PIP5K1A-016 protein_coding Homo_sapiens 0.00004 55
ENST00000460157 PIP5K1A-013 retained_intron Homo_sapiens 0.00001 55
ENST00000460661 PIP5K1P1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000464105 PIP5K1A-007 processed_transcript Homo_sapiens 0.00001 55
ENST00000478500 PIP5K1B-002 nonsense_mediated_decay Homo_sapiens 0 1362
ENST00000480546 PIPSL-002 processed_transcript Homo_sapiens 0.00000003 66
ENST00000486866 PIP5K1A-008 retained_intron Homo_sapiens 0.000000001 68
ENST00000489875 PIPSL-001 transcribed_processed_pseudogene Homo_sapiens 0.00000002 66
ENST00000541509 PIP5K1B-201 protein_coding Homo_sapiens 0 1522

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