C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183347-ENSG00000197147 CGP 9606 1:89364058-89597864
GeneTranscriptPositionBiotype
ENSG00000183347 (GBP6)
guanylate binding protein family, member 6 		ENST00000370456 (GBP6-001) 89364058-89386461 protein_coding
ENSG00000197147 (LRRC8B)
leucine rich repeat containing 8 family, member B 		ENST00000330947 (LRRC8B-001) 89524903-89597864 protein_coding
ENST00000358200 (LRRC8B-201) 89568471-89584462 protein_coding
ENST00000439853 (LRRC8B-202) 89568241-89597859 protein_coding
ENST00000449440 (LRRC8B-003) 89524836-89582961 protein_coding
ENSG00000225492 (GBP1P1)
guanylate binding protein 1, interferon-inducible pseudogene 1 		ENST00000394662 (GBP1P1-001) 89410319-89426243 transcribed_unprocessed_pseudogene
ENST00000513638 (GBP1P1-002) 89407679-89424934 processed_transcript
ENSG00000231999 (FLJ27354)
uncharacterized LOC400761 		ENST00000415584 (FLJ27354-002) 89624850-89632894 antisense
ENST00000443562 (FLJ27354-001) 89583241-89632191 antisense
ENST00000526694 (FLJ27354-003) 89626261-89632747 antisense
ENST00000528692 (FLJ27354-004) 89631876-89632761 antisense
CIL_00069D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079362-ENSMUSG00000070639 CGP 10090 5:105215699-105486189
GeneTranscriptPositionBiotype
ENSMUSG00000070639 (Lrrc8b)
leucine rich repeat containing 8 family, member B 		ENSMUST00000112707 (Lrrc8b-201) 105415775-105486189 protein_coding
ENSMUSG00000079362 (Gbp6)
guanylate binding protein 6 		ENSMUST00000050011 (Gbp6-201) 105270704-105293699 protein_coding
ENSMUST00000065588 (Gbp6-202) 105215699-105239533 protein_coding
ENSMUSG00000092021 (Gbp11)
guanylate binding protein 11 		ENSMUST00000100960 (Gbp11-001) 105323042-105346472 polymorphic_pseudogene
ENSMUST00000171587 (Gbp11-201) 105326480-105343929 protein_coding
ENSMUSG00000097237 (Gm26519)
predicted gene, 26519 		ENSMUST00000181193 (Gm26519-201) 105401245-105406970 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069D_0001ENSG00000183347ENST00000370456ENSG00000197147ENST00000330947ENST00000358200ENST00000439853ENST00000449440ENSG00000225492ENST00000394662ENST00000513638ENSG00000231999ENST00000415584ENST00000443562ENST00000526694ENST00000528692CIL_00069D_0002ENSMUSG00000070639ENSMUST00000112707ENSMUSG00000079362ENSMUST00000050011ENSMUST00000065588ENSMUSG00000092021ENSMUST00000100960ENSMUST00000171587ENSMUSG00000097237ENSMUST00000181193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069D_0001ENSG00000183347ENST00000370456ENSG00000197147ENST00000330947ENST00000358200ENST00000439853ENSG00000225492ENST00000394662ENST00000513638ENSG00000231999ENST00000415584CIL_00069D_0002ENSMUSG00000070639ENSMUST00000112707ENSMUSG00000079362ENSMUST00000050011ENSMUST00000065588ENSMUSG00000092021ENSMUST00000100960ENSMUST00000171587ENSMUSG00000097237ENSMUST00000181193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183347 ENST00000370456 0.020±0.00 0.087±0.00 N/A 0.065±0.00 0.059±0.01 0.032±0.00 0.026±0.00 0.023±0.00 0.046±0.02 0.375±0.25 0.035±0.00 2.772±2.95 0.008±0.00 0.096±0.04
ENSG00000197147 ENST00000330947 N/A 0.622±0.00 N/A 3.595±1.93 N/A N/A N/A 0.579±0.00 0.262±0.00 1.101±0.00 N/A 0.624±0.00 N/A N/A
ENST00000358200 N/A N/A N/A N/A N/A N/A 0.456±0.00 0.576±0.00 N/A N/A 0.653±0.00 N/A N/A 4.375±1.22
ENST00000439853 1.630±0.00 0.976±0.00 0.505±0.00 4.833±0.00 1.658±0.00 1.078±0.03 0.504±0.08 0.110±0.00 0.708±0.06 1.045±0.00 0.666±0.51 0.796±0.72 0.336±0.14 1.344±0.00
ENST00000449440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225492 ENST00000394662 0.113±0.00 0.375±0.00 N/A 0.050±0.00 0.116±0.06 0.303±0.00 0.215±0.00 0.061±0.00 0.014±0.00 2.499±0.00 0.068±0.00 0.260±0.04 0.138±0.09 0.230±0.11
ENST00000513638 0.121±0.00 0.304±0.00 N/A 0.061±0.03 0.457±0.00 0.120±0.00 0.163±0.02 0.150±0.00 N/A 2.752±0.00 0.811±0.00 0.463±0.22 0.141±0.08 0.143±0.05
ENSG00000231999 ENST00000415584 N/A N/A N/A N/A N/A N/A N/A 0.554±0.00 N/A N/A N/A N/A N/A N/A
ENST00000443562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000070639 ENSMUST00000112707 3.530±0.76 35.655±7.16 0.893±0.00 4.437±1.69 4.377±2.71 5.339±1.10 1.219±0.44 7.773±2.65 0.720±0.85 12.822±2.16 0.235±0.05 9.750±0.80 3.392±0.13 234.747±104.02
ENSMUSG00000079362 ENSMUST00000050011 5.265±0.40 3.640±0.68 3.514±0.43 0.297±0.20 5.682±0.95 0.660±0.39 2.739±1.24 2.139±0.34 3.573±2.12 3.331±0.43 1.549±0.41 2.507±0.79 0.636±0.41 0.133±0.07
ENSMUST00000065588 0.504±0.04 0.350±0.11 0.297±0.16 0.216±0.19 0.932±0.16 0.032±0.00 0.061±0.04 0.329±0.09 2.613±2.93 0.135±0.02 0.721±0.18 0.156±0.10 0.134±0.17 0.021±0.01
ENSMUSG00000092021 ENSMUST00000100960 0.849±0.26 0.469±0.01 N/A 0.234±0.14 1.366±0.50 0.098±0.04 0.028±0.00 0.077±0.05 1.654±1.24 0.155±0.00 0.049±0.02 0.325±0.22 0.212±0.20 0.031±0.02
ENSMUST00000171587 0.433±0.25 0.375±0.33 N/A N/A 0.462±0.17 0.089±0.03 0.128±0.04 0.085±0.02 1.318±0.00 0.108±0.05 0.023±0.01 0.219±0.07 0.104±0.08 0.086±0.01
ENSMUSG00000097237 ENSMUST00000181193 N/A N/A 0.003±0.00 0.025±0.02 0.016±0.00 N/A N/A 0.014±0.00 0.002±0.00 N/A 0.017±0.00 N/A N/A 0.102±0.05

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