C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: apurinic/apyrimidinic endonuclease 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112720 Apex2-001 ENSMUSG00000025269 10090 - X:150568862-150589844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainOvaryENSMUST00000112720
Transcript ID Bladder Brain Ovary
ENSMUST00000112720 0.520±0.09 0.790±0.67 0.504±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YC CIL_0000YC_0002 CGP X:150519519-150589868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000737 IBA DNA catabolic process, endonucleolytic
GO:0000738 IBA DNA catabolic process, exonucleolytic
GO:0003677 IEA DNA binding
GO:0003906 IBA DNA-(apurinic or apyrimidinic site) lyase activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006284 IBA base-excision repair
GO:0008270 IEA zinc ion binding
GO:0008311 IBA double-stranded DNA 3'-5' exodeoxyribonuclease activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374987 APEX2-001 protein_coding Homo_sapiens 0 1469
ENST00000471758 APEX2-002 processed_transcript Homo_sapiens 0 446

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