C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G-rich RNA sequence binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113234 Grsf1-002 ENSMUSG00000044221 10090 - 5:88659458-88675666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000113234
Transcript ID Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000113234 2.862±0.00 8.027±0.97 12.599±1.31 5.624±0.00 2.927±0.47 7.184±2.84 33.800±1.04 15.953±6.23 3.525±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LT CIL_0005LT_0003 CGP 5:88583574-88676171
CIL_00051M CIL_00051M_0003 CGP 5:88659448-88762058

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005739 IDA mitochondrion
GO:0009952 IMP anterior/posterior pattern specification
GO:0016331 IMP morphogenesis of embryonic epithelium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254799 GRSF1-001 protein_coding Homo_sapiens 0 1452
ENST00000499044 GRSF1-004 protein_coding Homo_sapiens 0 1448
ENST00000502323 GRSF1-006 protein_coding Homo_sapiens 0 1450
ENST00000505068 GRSF1-002 retained_intron Homo_sapiens 0 1098
ENST00000506453 GRSF1-017 nonsense_mediated_decay Homo_sapiens 0 726
ENST00000514161 GRSF1-005 protein_coding Homo_sapiens 0 1594
ENST00000545193 GRSF1-201 protein_coding Homo_sapiens 0 1452

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