C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G-rich RNA sequence binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506453 GRSF1-017 ENSG00000132463 9606 - 4:70820699-70833217 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000506453
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000506453 6.155±0.00 10.070±0.00 11.830±0.00 11.471±0.00 20.395±0.00 11.073±0.00 11.483±0.00 13.303±0.00 25.243±0.00 15.446±1.31 13.497±6.91 9.349±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LT CIL_0005LT_0002 CGP 4:70704204-70839945
CIL_00051M CIL_00051M_0002 CGP 4:70815782-71022449

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113234 Grsf1-002 protein_coding Mus_musculus 0 726
ENSMUST00000078945 Grsf1-001 protein_coding Mus_musculus 0 726
ENSMUST00000130408 Grsf1-007 retained_intron Mus_musculus 0 649
ENSMUST00000153565 Grsf1-003 protein_coding Mus_musculus 0.000000000000002 88

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