C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MyoD family inhibitor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113280 Mdfi-008 ENSMUSG00000032717 10090 - 17:47815328-47833241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000113280
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000113280 0.607±0.00 0.268±0.05 15.041±0.00 17.556±3.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720
CIL_0008F3 CIL_0008F3_0002 VISTA 17:47757242-48358147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0048704 IMP embryonic skeletal system morphogenesis
GO:0060707 IMP trophoblast giant cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230321 MDFI-001 protein_coding Homo_sapiens 0 473
ENST00000373050 MDFI-002 protein_coding Homo_sapiens 0 575
ENST00000373051 MDFI-008 protein_coding Homo_sapiens 0 473
ENST00000419164 MDFI-003 protein_coding Homo_sapiens 0 407
ENST00000432027 MDFI-005 protein_coding Homo_sapiens 0 318
ENST00000435476 MDFI-007 protein_coding Homo_sapiens 0 379

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