C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113627 Pin4-001 ENSMUSG00000079480 10090 + X:102119447-102127669 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113627 1.757±0.82 0.664±0.31 26.574±3.52 12.784±6.16 0.940±0.64 1.260±0.61 1.522±0.38 3.439±1.11 22.233±21.96 1.278±0.44 19.523±1.90 9.364±15.56 21.926±14.59 4.607±2.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066A CIL_00066A_0002 CGP X:102119447-102157091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003681 IEA bent DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005759 IEA mitochondrial matrix
GO:0005819 IEA spindle
GO:0005856 IEA cytoskeleton
GO:0006364 IEA rRNA processing
GO:0006457 IEA protein folding
GO:0030684 IEA preribosome
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218432 PIN4-002 protein_coding Homo_sapiens 0 355
ENST00000373662 PIN4-004 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000373669 PIN4-001 protein_coding Homo_sapiens 0 641
ENST00000413162 RP11-134G8.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000423432 PIN4-201 protein_coding Homo_sapiens 0 353
ENST00000439980 PIN4-006 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000446576 PIN4-003 protein_coding Homo_sapiens 0 303
ENST00000451079 PIN4P1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000496835 PIN4-005 protein_coding Homo_sapiens 0 353
ENST00000558741 RP11-597K23.1-001 processed_pseudogene Homo_sapiens 0 538

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