C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373669 PIN4-001 ENSG00000102309 9606 + X:72181679-72198344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373669
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373669 3.285±0.00 4.447±0.00 4.466±0.40 3.184±1.78 4.108±2.82 1.596±0.81 3.442±2.80 2.415±1.79 1.099±0.34 1.877±0.37 4.737±2.96 6.312±1.79 5.102±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066A CIL_00066A_0001 CGP X:72181353-72302926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003677 IEA DNA binding
GO:0003681 IDA bent DNA binding
GO:0003690 IDA double-stranded DNA binding
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0005819 IDA spindle
GO:0005856 IEA cytoskeleton
GO:0006364 IMP rRNA processing
GO:0006457 IEA protein folding
GO:0016853 IEA isomerase activity
GO:0030684 IDA preribosome
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113627 Pin4-001 protein_coding Mus_musculus 0 641
ENSMUST00000154478 Gm6851-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000119052 Gm11196-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000144367 Pin4-002 processed_transcript Mus_musculus 0 582
ENSMUST00000118147 Gm15460-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000122291 Gm14813-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000121764 Gm15644-001 processed_pseudogene Mus_musculus 0 510

Loading