| Transcript ID | Breast | Colon | Ovary |
|---|---|---|---|
| ENSMUST00000113683 | 0.926±0.15 | 1.529±0.00 | 0.826±0.05 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | small nuclear ribonucleoprotein 27 (U4/U6.U5) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000113683  |
Snrnp27-002 |
ENSMUSG00000001158 |
10090 | - |
6:86675672-86684522  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089T | CIL_00089T_0002 | VISTA | 6:86179085-86780169 |
| CIL_0005JQ | CIL_0005JQ_0002 | CGP | 6:86647044-86684522 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0005634 | IEA | nucleus |
| GO:0006397 | IEA | mRNA processing |
| GO:0008150 | ND | biological_process |
| GO:0008380 | IEA | RNA splicing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000244227
|
SNRNP27-001 | protein_coding | Homo_sapiens | 0 | 558 |
|
ENST00000409116
|
SNRNP27-002 | protein_coding | Homo_sapiens | 0 | 477 |
|
ENST00000429606
|
SNRNP27-001 | processed_pseudogene | Homo_sapiens | 0 | 374 |
|
ENST00000450162
|
SNRNP27-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 558 |
|
ENST00000488986
|
SNRNP27-004 | processed_transcript | Homo_sapiens | 0 | 257 |
