C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409116 SNRNP27-002 ENSG00000124380 9606 + 2:69893959-69905218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409116
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409116 10.022±0.00 7.757±0.00 9.456±0.88 8.006±0.00 8.454±0.00 5.214±3.29 5.985±2.60 3.913±0.00 9.533±0.00 11.440±0.00 8.822±0.00 6.477±2.45 7.253±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0001 VISTA 2:69833131-70434482

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113683 Snrnp27-002 protein_coding Mus_musculus 0 477
ENSMUST00000001186 Snrnp27-001 protein_coding Mus_musculus 0 477
ENSMUST00000131674 Snrnp27-003 processed_transcript Mus_musculus 0 440
ENSDART00000051655 snrnp27-001 protein_coding Danio_rerio 0.0000000009 69

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