C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113744 Gdpd2-005 ENSMUSG00000019359 10090 + X:100730186-100738894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000113744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000113744 0.049±0.00 0.347±0.05 0.018±0.00 1.316±0.00 0.052±0.02 0.545±0.10 0.035±0.03 0.481±0.00 0.069±0.00 1.209±0.49 0.113±0.00 3.935±1.22 0.414±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009H CIL_00009H_0002 CGP X:100625737-100738895
CIL_00009K CIL_00009K_0002 CGP X:100729873-100818410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0047394 IEA glycerophosphoinositol inositolphosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374382 GDPD2-001 protein_coding Homo_sapiens 0 1849
ENST00000453994 GDPD2-201 protein_coding Homo_sapiens 0 1555
ENST00000472623 GDPD2-002 processed_transcript Homo_sapiens 0 684
ENST00000536730 GDPD2-202 protein_coding Homo_sapiens 0 1705
ENST00000538649 GDPD2-203 protein_coding Homo_sapiens 0 1533

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