C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: outer dense fiber of sperm tails 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113756 Odf2-002 ENSMUSG00000026790 10090 + 2:29889795-29931745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000113756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000113756 2.215±0.00 1.771±0.00 9.329±1.99 12.082±0.64 2.074±0.38 1.899±0.03 2.038±0.86 1.388±0.14 11.126±3.90 5.254±2.73 1.011±0.22 5.344±3.67 4.847±1.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E9 CIL_0007E9_0002 CGP 2:29869164-29931746
CIL_0007EC CIL_0007EC_0002 CGP 2:29889221-29960371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005814 IDA centriole
GO:0005874 IEA microtubule
GO:0005929 IDA cilium
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351030 ODF2-201 protein_coding Homo_sapiens 0 3683
ENST00000372791 ODF2-006 protein_coding Homo_sapiens 0 2187
ENST00000372807 ODF2-009 protein_coding Homo_sapiens 0 3299
ENST00000372814 ODF2-008 protein_coding Homo_sapiens 0 2390
ENST00000393527 ODF2-005 protein_coding Homo_sapiens 0 2939
ENST00000393533 ODF2-018 protein_coding Homo_sapiens 0 2390
ENST00000421776 ODF2-020 protein_coding Homo_sapiens 0 1212
ENST00000432065 ODF2-012 protein_coding Homo_sapiens 0 569
ENST00000434106 ODF2-011 protein_coding Homo_sapiens 0 3142
ENST00000444119 ODF2-002 protein_coding Homo_sapiens 0 2926
ENST00000444993 ODF2-010 retained_intron Homo_sapiens 0 385
ENST00000446274 ODF2-003 protein_coding Homo_sapiens 0 385
ENST00000448249 ODF2-004 protein_coding Homo_sapiens 0 1943
ENST00000469582 ODF2-001 retained_intron Homo_sapiens 0 813
ENST00000470061 ODF2-007 protein_coding Homo_sapiens 0 298
ENST00000483070 ODF2-015 protein_coding Homo_sapiens 0 411
ENST00000488909 ODF2-016 retained_intron Homo_sapiens 0 586
ENST00000497812 ODF2-014 protein_coding Homo_sapiens 0 507
ENST00000546203 ODF2-019 protein_coding Homo_sapiens 0 2187
ENST00000604420 ODF2-017 protein_coding Homo_sapiens 0 3142

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