C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S18B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113782 Mrps18b-002 ENSMUSG00000024436 10090 - 17:35910379-35916389 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000113782
Transcript ID Ovary Placenta Testis
ENSMUST00000113782 28.553±0.00 50.953±6.18 36.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259873 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000327800 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000412451 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000426945 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000430402 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000451032 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000454427 MRPS18B-001 protein_coding Homo_sapiens 0 387
ENST00000460640 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000464426 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000468755 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000469397 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000469706 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000472229 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000472267 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000472444 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000476123 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000477010 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000481158 MRPS18B-002 retained_intron Homo_sapiens 0 387
ENST00000489289 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000493769 MRPS18B-005 processed_transcript Homo_sapiens 0 387
ENST00000498459 MRPS18B-002 retained_intron Homo_sapiens 0 387

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