C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIIC, polypeptide 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113889 Gtf3c5-001 ENSMUSG00000026816 10090 - 2:28566311-28583189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113889 4.765±3.80 10.795±0.76 1.162±0.00 2.587±0.62 5.580±2.26 10.508±1.74 2.945±1.05 5.063±2.20 2.133±0.95 5.365±3.66 1.649±0.00 10.676±4.96 2.597±1.77 4.120±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000127 IEA transcription factor TFIIIC complex
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0035914 IMP skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342018 GTF3C5-005 protein_coding Homo_sapiens 0 671
ENST00000372097 GTF3C5-003 protein_coding Homo_sapiens 0 1519
ENST00000372099 GTF3C5-201 protein_coding Homo_sapiens 0 944
ENST00000372108 GTF3C5-004 protein_coding Homo_sapiens 0 1421
ENST00000435745 GTF3C5-001 protein_coding Homo_sapiens 0 193
ENST00000439697 GTF3C5-007 protein_coding Homo_sapiens 0 684
ENST00000440319 GTF3C5-006 protein_coding Homo_sapiens 0 715
ENST00000461871 GTF3C5-011 processed_transcript Homo_sapiens 0 211

Loading