C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113952 Wdr5-001 ENSMUSG00000026917 10090 + 2:27515157-27536535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113952 13.722±5.10 8.909±0.78 13.900±2.36 14.495±8.34 9.845±0.51 9.719±0.81 8.542±0.31 14.607±0.94 16.027±6.39 12.072±0.90 8.017±1.04 16.917±2.46 18.734±7.65 11.039±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000150 CIL_000150_0002 CGP 2:27445579-27536535
CIL_000151 CIL_000151_0002 CGP 2:27515157-27762957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 ISS histone acetyltransferase complex
GO:0001501 IDA skeletal system development
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0034968 ISS histone lysine methylation
GO:0035064 ISS methylated histone binding
GO:0035097 ISS histone methyltransferase complex
GO:0035948 IGI positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0043966 IEA histone H3 acetylation
GO:0043981 ISS histone H4-K5 acetylation
GO:0043982 ISS histone H4-K8 acetylation
GO:0043984 ISS histone H4-K16 acetylation
GO:0043995 ISS histone acetyltransferase activity (H4-K5 specific)
GO:0043996 ISS histone acetyltransferase activity (H4-K8 specific)
GO:0046972 ISS histone acetyltransferase activity (H4-K16 specific)
GO:0048188 ISS Set1C/COMPASS complex
GO:0051568 ISS histone H3-K4 methylation
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019750 wdr5-001 protein_coding Danio_rerio 0 863
ENSDART00000147768 wdr5-003 protein_coding Danio_rerio 0 448
ENST00000358625 WDR5-001 protein_coding Homo_sapiens 0 1197
ENST00000507033 RP11-472B18.1-001 transcribed_processed_pseudogene Homo_sapiens 0 870
ENST00000513652 RP11-472B18.1-003 processed_transcript Homo_sapiens 0 684
ENST00000597991 RP11-472B18.1-004 processed_transcript Homo_sapiens 0 905

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