C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358625 WDR5-001 ENSG00000196363 9606 + 9:134136088-134159968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358625
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358625 6.732±0.00 6.381±0.00 0.801±0.00 3.771±3.44 4.141±2.91 4.705±3.32 1.343±0.52 5.479±2.33 4.695±2.77 3.050±0.00 10.694±9.01 16.199±8.40 14.732±3.16 39.998±6.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000150 CIL_000150_0001 CGP 9:134030305-134159968
CIL_000151 CIL_000151_0001 CGP 9:134135365-134440585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0001501 IEA skeletal system development
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035097 IDA histone methyltransferase complex
GO:0035948 IEA positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0043966 IDA histone H3 acetylation
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043984 IDA histone H4-K16 acetylation
GO:0043995 IDA histone acetyltransferase activity (H4-K5 specific)
GO:0043996 IDA histone acetyltransferase activity (H4-K8 specific)
GO:0046972 IDA histone acetyltransferase activity (H4-K16 specific)
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113952 Wdr5-001 protein_coding Mus_musculus 0 1197
ENSMUST00000140396 Wdr5-003 protein_coding Mus_musculus 0 429
ENSMUST00000125088 Wdr5-004 processed_transcript Mus_musculus 0 213

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