C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000151_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196363-ENSG00000186350 CGP 9606 9:134135365-134440585
GeneTranscriptPositionBiotype
ENSG00000196363 (WDR5)
WD repeat domain 5
ENST00000358625 (WDR5-001) 134136088-134159968 protein_coding
ENST00000608739 (WDR5-003) 134135377-134141974 protein_coding
ENST00000608937 (WDR5-002) 134135365-134140790 protein_coding
ENSG00000221676 (RNU6ATAC)
RNA, U6atac small nuclear (U12-dependent splicing)
ENST00000408749 (RNU6ATAC-201) 134164439-134164564 snRNA
ENSG00000263897 (MIR4669)
microRNA 4669
ENST00000585099 (MIR4669-201) 134379411-134379472 miRNA
ENSG00000273473 (LL09NC01-139C3.1)
ENST00000608264 (LL09NC01-139C3.1-001) 134168769-134169340 lincRNA
ENSG00000279929 (RP11-145E17.3)
ENST00000623292 (RP11-145E17.3-001) 134298463-134300413 TEC
CIL_000151_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026917-ENSMUSG00000015846 CGP 10090 2:27515157-27762957
GeneTranscriptPositionBiotype
ENSMUSG00000015846 (Rxra)
retinoid X receptor alpha
ENSMUST00000077257 (Rxra-001) 27677201-27762957 protein_coding
ENSMUST00000100251 (Rxra-002) 27709292-27760183 protein_coding
ENSMUST00000113934 (Rxra-003) 27710583-27760183 protein_coding
ENSMUST00000129514 (Rxra-004) 27676440-27741898 protein_coding
ENSMUST00000148756 (Rxra-005) 27740201-27748671 processed_transcript
ENSMUST00000166775 (Rxra-201) 27677262-27761417 protein_coding
ENSMUSG00000026917 (Wdr5)
WD repeat domain 5
ENSMUST00000113952 (Wdr5-001) 27515157-27536535 protein_coding
ENSMUST00000125088 (Wdr5-004) 27527772-27533355 processed_transcript
ENSMUST00000140396 (Wdr5-003) 27519761-27535043 protein_coding
ENSMUST00000144315 (Wdr5-002) 27515157-27520653 processed_transcript
ENSMUSG00000080538 (Gm25541)
predicted gene, 25541
ENSMUST00000116888 (Gm25541-201) 27539805-27539930 snRNA
ENSMUSG00000085929 (Gm13421)
predicted gene 13421
ENSMUST00000132898 (Gm13421-001) 27540429-27543185 processed_transcript
ENSMUST00000142511 (Gm13421-002) 27540426-27543362 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000151_0001ENSG00000196363ENST00000358625ENST00000608739ENST00000608937ENSG00000221676ENST00000408749ENSG00000263897ENST00000585099ENSG00000273473ENST00000608264ENSG00000279929ENST00000623292CIL_000151_0002ENSMUSG00000015846ENSMUST00000077257ENSMUST00000100251ENSMUST00000113934ENSMUST00000129514ENSMUST00000148756ENSMUST00000166775ENSMUSG00000026917ENSMUST00000113952ENSMUST00000125088ENSMUST00000140396ENSMUST00000144315ENSMUSG00000080538ENSMUST00000116888ENSMUSG00000085929ENSMUST00000132898ENSMUST00000142511
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000151_0001ENSG00000196363ENST00000358625ENSG00000221676ENST00000408749ENSG00000263897ENST00000585099ENSG00000273473ENST00000608264ENSG00000279929ENST00000623292CIL_000151_0002ENSMUSG00000015846ENSMUST00000077257ENSMUST00000100251ENSMUST00000113934ENSMUST00000129514ENSMUST00000166775ENSMUSG00000026917ENSMUST00000113952ENSMUST00000140396ENSMUST00000144315ENSMUSG00000080538ENSMUST00000116888ENSMUSG00000085929ENSMUST00000132898ENSMUST00000142511
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196363 ENST00000358625 6.732±0.00 6.381±0.00 0.801±0.00 3.771±3.44 4.141±2.91 4.705±3.32 1.343±0.52 5.479±2.33 4.695±2.77 3.050±0.00 10.694±9.01 16.199±8.40 14.732±3.16 39.998±6.11
ENST00000608739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221676 ENST00000408749 1.972±0.00 2.108±0.00 N/A 61.781±57.86 110.898±110.14 66.710±66.03 108.192±107.52 21.889±21.40 366.910±366.25 122.528±120.80 35.736±31.20 30.700±45.90 0.756±0.00 2.682±1.62
ENSG00000263897 ENST00000585099 N/A N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A N/A N/A N/A N/A
ENSG00000273473 ENST00000608264 0.050±0.00 0.713±0.00 N/A 0.174±0.04 0.302±0.00 N/A N/A 0.089±0.01 0.362±0.05 0.234±0.14 N/A N/A 0.111±0.00 0.276±0.02
ENSG00000279929 ENST00000623292 0.008±0.00 0.047±0.00 N/A 0.009±0.00 0.072±0.00 N/A 0.022±0.00 0.016±0.00 0.014±0.00 N/A 0.007±0.00 0.022±0.00 N/A 0.033±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015846 ENSMUST00000077257 31.737±12.64 18.099±1.93 30.459±0.24 3.064±1.68 27.828±9.75 21.374±2.64 7.553±3.56 19.593±7.49 38.352±37.81 20.647±7.10 23.476±7.65 16.044±2.57 26.921±18.30 2.662±0.21
ENSMUST00000100251 14.020±0.00 N/A N/A 3.979±1.68 N/A 6.210±0.00 N/A 12.273±0.00 19.345±16.40 18.313±0.63 N/A 11.320±3.39 25.982±17.88 6.065±1.47
ENSMUST00000113934 8.284±0.00 15.437±3.21 N/A N/A 26.439±7.06 15.960±4.42 N/A 11.747±1.94 N/A N/A N/A 17.240±4.39 N/A 13.086±3.01
ENSMUST00000129514 N/A 25.007±3.87 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.206±0.80 N/A N/A
ENSMUSG00000026917 ENSMUST00000113952 13.722±5.10 8.909±0.78 13.900±2.36 14.495±8.34 9.845±0.51 9.719±0.81 8.542±0.31 14.607±0.94 16.027±6.39 12.072±0.90 8.017±1.04 16.917±2.46 18.734±7.65 11.039±1.19
ENSMUST00000125088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140396 N/A N/A N/A 4.233±0.00 N/A N/A N/A N/A N/A N/A N/A 13.049±0.00 20.050±2.95 6.583±0.00
ENSMUST00000144315 N/A 23.014±3.74 N/A N/A 10.004±0.85 5.463±1.34 N/A N/A N/A 6.596±0.00 N/A 23.630±5.13 N/A N/A
ENSMUSG00000080538 ENSMUST00000116888 782.316±11.03 N/A 64.431±5.64 25.501±16.72 N/A 4651.755±744.79 N/A 1623.550±564.11 445.674±410.43 1351.270±76.84 5.016±1.57 N/A 29.656±4.52 999.411±0.00
ENSMUSG00000085929 ENSMUST00000132898 0.130±0.01 0.218±0.00 N/A 0.354±0.00 0.275±0.02 0.357±0.20 0.180±0.00 0.104±0.01 0.480±0.19 0.332±0.06 N/A 0.643±0.37 2.234±0.00 0.993±0.00
ENSMUST00000142511 0.359±0.09 N/A N/A 0.404±0.00 0.154±0.05 0.314±0.10 0.159±0.00 0.292±0.17 0.484±0.13 0.302±0.16 0.192±0.10 0.204±0.08 1.048±0.41 0.486±0.25

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