C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junction adhesion molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114195 Jam2-001 ENSMUSG00000053062 10090 + 16:84774123-84825928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114195 13.363±0.67 4.486±1.22 11.317±0.42 7.994±3.63 8.525±1.70 3.709±0.69 27.149±1.37 2.775±0.45 1.251±0.67 11.092±0.73 6.483±0.73 18.638±2.72 1.592±0.46 1.411±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0002 CGP 16:84717576-84825928
CIL_0000ML CIL_0000ML_0003 CGP 16:84774123-84835625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007162 IGI negative regulation of cell adhesion
GO:0016021 IEA integral component of membrane
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312957 JAM2-201 protein_coding Homo_sapiens 0 669
ENST00000400532 JAM2-003 protein_coding Homo_sapiens 0 752
ENST00000460679 JAM2-007 nonsense_mediated_decay Homo_sapiens 0 608
ENST00000471689 JAM2-009 retained_intron Homo_sapiens 4e-35 152
ENST00000477351 JAM2-008 processed_transcript Homo_sapiens 2e-29 132
ENST00000480456 JAM2-001 protein_coding Homo_sapiens 0 872
ENST00000492962 JAM2-006 retained_intron Homo_sapiens 0 243

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