C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adducin 1 (alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114338 Add1-001 ENSMUSG00000029106 10090 + 5:34573664-34632308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000114338
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114338 8.401±0.00 7.951±1.33 25.782±2.56 11.614±0.54 21.409±3.04 8.853±3.90 6.122±0.85 23.424±16.79 14.950±3.94 14.417±3.97 7.403±0.09 2.912±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074C CIL_00074C_0002 CGP 5:34525838-34632308
CIL_00056E CIL_00056E_0002 CGP 5:34573664-34637212

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IMP cell morphogenesis
GO:0001701 IMP in utero embryonic development
GO:0005198 IDA structural molecule activity
GO:0005516 IEA calmodulin binding
GO:0005856 IDA cytoskeleton
GO:0006884 IMP cell volume homeostasis
GO:0016020 IDA membrane
GO:0020027 IMP hemoglobin metabolic process
GO:0030218 IMP erythrocyte differentiation
GO:0035264 IMP multicellular organism growth
GO:0048873 IMP homeostasis of number of cells within a tissue

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264758 ADD1-201 protein_coding Homo_sapiens 0 1866
ENST00000355842 ADD1-002 protein_coding Homo_sapiens 0 2137
ENST00000398123 ADD1-003 protein_coding Homo_sapiens 0 1827
ENST00000398125 ADD1-202 protein_coding Homo_sapiens 0 1866
ENST00000398129 ADD1-001 protein_coding Homo_sapiens 0 2410
ENST00000446856 ADD1-203 protein_coding Homo_sapiens 0 1544
ENST00000503169 ADD1-006 retained_intron Homo_sapiens 0 1831
ENST00000503455 ADD1-013 protein_coding Homo_sapiens 0 1832
ENST00000506157 ADD1-007 retained_intron Homo_sapiens 0 472
ENST00000508277 ADD1-009 protein_coding Homo_sapiens 0 268
ENST00000508684 ADD1-008 retained_intron Homo_sapiens 0 1146
ENST00000509039 ADD1-005 retained_intron Homo_sapiens 0 1491
ENST00000510101 ADD1-010 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000511797 ADD1-011 protein_coding Homo_sapiens 0 510
ENST00000513328 ADD1-014 protein_coding Homo_sapiens 0 2806
ENST00000513762 ADD1-012 retained_intron Homo_sapiens 0 636
ENST00000514940 ADD1-015 protein_coding Homo_sapiens 0 730
ENST00000534870 ADD1-017 retained_intron Homo_sapiens 0 603
ENST00000536078 ADD1-019 retained_intron Homo_sapiens 0 483
ENST00000536424 ADD1-022 protein_coding Homo_sapiens 0 291
ENST00000540541 ADD1-018 retained_intron Homo_sapiens 0 267
ENST00000541051 ADD1-020 retained_intron Homo_sapiens 0 579

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