C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adducin 1 (alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264758 ADD1-201 ENSG00000087274 9606 + 4:2843857-2930073 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000264758
Transcript ID Adrenal Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000264758 17.044±0.00 16.351±0.00 28.522±0.00 8.444±0.00 12.562±0.00 17.759±0.00 7.668±0.00 12.873±0.00 10.454±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074C CIL_00074C_0001 CGP 4:2793023-2930076
CIL_00056E CIL_00056E_0001 CGP 4:2843857-2934859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0001701 IEA in utero embryonic development
GO:0003779 TAS actin binding
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006884 IEA cell volume homeostasis
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0008134 IPI transcription factor binding
GO:0008290 IDA F-actin capping protein complex
GO:0014069 IEA postsynaptic density
GO:0016020 IEA membrane
GO:0020027 IEA hemoglobin metabolic process
GO:0030036 IC actin cytoskeleton organization
GO:0030218 IEA erythrocyte differentiation
GO:0030425 IEA dendrite
GO:0030507 IDA spectrin binding
GO:0030837 IEA negative regulation of actin filament polymerization
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0032092 IDA positive regulation of protein binding
GO:0035264 IEA multicellular organism growth
GO:0042608 IEA T cell receptor binding
GO:0042803 IPI protein homodimerization activity
GO:0043197 IEA dendritic spine
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045111 IDA intermediate filament cytoskeleton
GO:0045202 IEA synapse
GO:0045766 IEA positive regulation of angiogenesis
GO:0045807 IEA positive regulation of endocytosis
GO:0046982 IPI protein heterodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048873 IEA homeostasis of number of cells within a tissue
GO:0051015 IDA actin filament binding
GO:0051016 IDA barbed-end actin filament capping
GO:0051017 IDA actin filament bundle assembly
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001108 Add1-002 protein_coding Mus_musculus 0 2604
ENSMUST00000052836 Add1-004 protein_coding Mus_musculus 0 2571
ENSMUST00000114338 Add1-001 protein_coding Mus_musculus 0 1866
ENSMUST00000114340 Add1-005 protein_coding Mus_musculus 0 1836
ENSMUST00000114335 Add1-003 protein_coding Mus_musculus 0 1827
ENSDART00000102731 add1-201 protein_coding Danio_rerio 0 935
ENSMUST00000152805 Add1-013 protein_coding Mus_musculus 0 577
ENSMUST00000146295 Add1-009 protein_coding Mus_musculus 0 527
ENSMUST00000147574 Add1-007 protein_coding Mus_musculus 0 527
ENSMUST00000135321 Add1-006 protein_coding Mus_musculus 0 507
ENSMUST00000144226 Add1-010 retained_intron Mus_musculus 0 309
ENSMUST00000145986 Add1-008 processed_transcript Mus_musculus 0 300

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