C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin associated protein-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114641 Cntnap2-001 ENSMUSG00000039419 10090 + 6:45060061-47301369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000114641
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114641 0.098±0.02 2.820±0.34 0.013±0.00 0.139±0.06 0.013±0.01 0.040±0.02 0.001±0.00 0.028±0.00 0.028±0.00 0.011±0.00 0.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0002 CGP 6:43345001-47301369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005769 IEA early endosome
GO:0005794 IEA Golgi apparatus
GO:0007155 IEA cell adhesion
GO:0007612 IEA learning
GO:0008076 IEA voltage-gated potassium channel complex
GO:0009986 IEA cell surface
GO:0016020 IEA membrane
GO:0019899 IEA enzyme binding
GO:0021756 IEA striatum development
GO:0021761 IEA limbic system development
GO:0021794 IEA thalamus development
GO:0021987 IEA cerebral cortex development
GO:0030534 IEA adult behavior
GO:0030673 IEA axolemma
GO:0031175 IGI neuron projection development
GO:0035176 IEA social behavior
GO:0044224 IDA juxtaparanode region of axon
GO:0071109 IEA superior temporal gyrus development
GO:0071205 IMP protein localization to juxtaparanode region of axon
GO:0071625 IEA vocalization behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361727 CNTNAP2-001 protein_coding Homo_sapiens 0 5262
ENST00000431078 CNTNAP5-001 protein_coding Homo_sapiens 2e-17 97
ENST00000455301 CNTNAP2-002 protein_coding Homo_sapiens 0 636
ENST00000463592 CNTNAP2-003 processed_transcript Homo_sapiens 0 1123
ENST00000602734 CNTNAP2-004 processed_transcript Homo_sapiens 0 1116
ENST00000613345 AC237044.1-201 protein_coding Homo_sapiens 0 1118

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