C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HIV TAT specific factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114751 Htatsf1-002 ENSMUSG00000067873 10090 + X:57053583-57057206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000114751
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000114751 6.393±2.80 48.973±6.32 11.373±4.31 8.574±1.34 4.871±1.71 4.650±1.52 2.785±1.38 9.814±4.18 21.453±7.15 1.361±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K2 CIL_0000K2_0002 CGP X:57043074-57067183
CIL_0000K3 CIL_0000K3_0002 CGP X:57053583-57106540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218364 HTATSF1-001 protein_coding Homo_sapiens 0 532
ENST00000422268 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000422677 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000425695 HTATSF1-003 protein_coding Homo_sapiens 0 525
ENST00000432008 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000436166 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000437306 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000439003 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000448450 HTATSF1-002 protein_coding Homo_sapiens 0 569
ENST00000455641 HTATSF1P-001 processed_pseudogene Homo_sapiens 8e-19 99
ENST00000535601 HTATSF1-201 protein_coding Homo_sapiens 0 569

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