C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000K3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102241-ENSG00000102243 CGP 9606 X:136497079-136556807
GeneTranscriptPositionBiotype
ENSG00000102241 (HTATSF1)
HIV-1 Tat specific factor 1
ENST00000218364 (HTATSF1-001) 136497511-136512346 protein_coding
ENST00000425695 (HTATSF1-003) 136497234-136502877 protein_coding
ENST00000448450 (HTATSF1-002) 136497221-136502941 protein_coding
ENST00000535601 (HTATSF1-201) 136497079-136512342 protein_coding
ENSG00000102243 (VGLL1)
vestigial-like family member 1
ENST00000370634 (VGLL1-001) 136532152-136556807 protein_coding
ENST00000440515 (VGLL1-002) 136536128-136556496 protein_coding
ENST00000456412 (VGLL1-004) 136536195-136556807 protein_coding
ENST00000470358 (VGLL1-003) 136550442-136556807 processed_transcript
CIL_0000K3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067873-ENSMUSG00000031131 CGP 10090 X:57053583-57106540
GeneTranscriptPositionBiotype
ENSMUSG00000031131 (Vgll1)
vestigial like 1 homolog (Drosophila)
ENSMUST00000033465 (Vgll1-001) 57088106-57106540 protein_coding
ENSMUST00000114745 (Vgll1-201) 57089312-57105529 protein_coding
ENSMUST00000114746 (Vgll1-202) 57089374-57106540 protein_coding
ENSMUST00000141936 (Vgll1-002) 57099586-57102061 protein_coding
ENSMUSG00000067873 (Htatsf1)
HIV TAT specific factor 1
ENSMUST00000088652 (Htatsf1-001) 57053615-57067183 protein_coding
ENSMUST00000114751 (Htatsf1-002) 57053583-57057206 protein_coding
ENSMUST00000134785 (Htatsf1-003) 57053898-57057204 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000K3_0001ENSG00000102241ENST00000218364ENST00000425695ENST00000448450ENST00000535601ENSG00000102243ENST00000370634ENST00000440515ENST00000456412ENST00000470358CIL_0000K3_0002ENSMUSG00000031131ENSMUST00000033465ENSMUST00000114745ENSMUST00000114746ENSMUST00000141936ENSMUSG00000067873ENSMUST00000088652ENSMUST00000114751ENSMUST00000134785
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000K3_0001ENSG00000102241ENST00000218364ENST00000535601ENSG00000102243ENST00000370634ENST00000440515ENST00000456412CIL_0000K3_0002ENSMUSG00000031131ENSMUST00000033465ENSMUST00000114745ENSMUST00000114746ENSMUST00000141936ENSMUSG00000067873ENSMUST00000088652ENSMUST00000114751ENSMUST00000134785
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102241 ENST00000218364 18.162±0.00 18.620±0.00 2.899±0.00 21.261±17.20 13.311±9.43 12.780±10.85 9.283±7.95 12.024±9.41 3.625±0.72 2.992±1.10 9.156±4.41 20.488±17.95 15.225±3.26 29.478±9.62
ENST00000425695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535601 N/A N/A N/A 1.596±0.00 N/A N/A 2.296±0.28 2.334±1.09 1.491±0.84 3.736±0.00 11.071±0.00 10.233±8.83 13.427±0.00 13.346±0.00
ENSG00000102243 ENST00000370634 N/A N/A 0.135±0.00 0.017±0.00 0.639±0.60 N/A N/A 2.204±0.00 0.677±0.00 0.025±0.00 N/A 0.200±0.14 167.961±96.21 0.030±0.01
ENST00000440515 N/A N/A N/A N/A N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A
ENST00000456412 N/A N/A N/A N/A N/A N/A N/A 1.230±0.00 N/A N/A 2.224±0.00 0.329±0.14 N/A 0.070±0.00
ENST00000470358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031131 ENSMUST00000033465 N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.609±0.92 N/A
ENSMUST00000114745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A 0.065±0.00
ENSMUST00000114746 N/A N/A 0.043±0.00 0.005±0.00 N/A 0.041±0.00 0.013±0.00 N/A 0.012±0.01 N/A N/A 0.036±0.01 2.439±2.18 0.073±0.04
ENSMUST00000141936 N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.140±0.00 N/A N/A N/A 0.293±0.12 N/A N/A
ENSMUSG00000067873 ENSMUST00000088652 3.279±0.56 N/A 10.336±1.11 25.462±17.60 3.326±2.18 1.548±0.27 6.502±0.91 3.639±0.95 5.656±3.69 3.623±1.17 35.790±4.92 17.508±22.22 95.354±73.91 12.178±15.99
ENSMUST00000114751 6.393±2.80 48.973±6.32 N/A N/A 11.373±4.31 8.574±1.34 4.871±1.71 4.650±1.52 2.785±1.38 9.814±4.18 N/A 21.453±7.15 N/A 1.361±0.18
ENSMUST00000134785 1.320±0.00 N/A 1.428±0.00 N/A 0.580±0.01 N/A N/A N/A 0.683±0.15 N/A N/A N/A 6.139±3.02 1.126±0.27

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