C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114848 Taf11-001 ENSMUSG00000024218 10090 - 17:27901122-27909242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114848
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114848 2.383±0.19 6.943±0.10 2.224±0.00 5.662±0.76 2.130±1.39 2.432±0.32 1.084±0.16 2.444±0.66 1.340±0.41 3.055±0.05 0.951±0.20 3.244±1.18 1.952±0.48 8.711±6.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EW CIL_0002EW_0002 CGP 17:27856490-27909242
CIL_0002EV CIL_0002EV_0002 CGP 17:27901122-28062600

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003713 IEA transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0005794 IEA Golgi apparatus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0042809 IEA vitamin D receptor binding
GO:0043923 IEA positive regulation by host of viral transcription
GO:0046966 IEA thyroid hormone receptor binding
GO:0046982 IEA protein heterodimerization activity
GO:0047485 IEA protein N-terminus binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361288 TAF11-001 protein_coding Homo_sapiens 0 647
ENST00000420584 TAF11-201 protein_coding Homo_sapiens 0 385
ENST00000452449 UHRF1BP1-201 protein_coding Homo_sapiens 4e-18 99

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