C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kalirin, RhoGEF kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114964 Kalrn-014 ENSMUSG00000061751 10090 - 16:34013146-34096028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114964
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114964 2.175±0.23 0.853±0.14 7.834±1.06 3.571±0.39 2.868±0.39 6.991±1.81 3.285±0.55 3.871±0.32 7.173±2.69 6.773±2.65 0.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HE CIL_0008HE_0002 VISTA 16:33792411-34395018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291478 KALRN-001 protein_coding Homo_sapiens 0 2032
ENST00000354186 KALRN-004 protein_coding Homo_sapiens 0 2032
ENST00000360013 KALRN-201 protein_coding Homo_sapiens 0 2032
ENST00000393496 KALRN-002 protein_coding Homo_sapiens 0 2501
ENST00000454902 KALRN-003 protein_coding Homo_sapiens 0 822
ENST00000459915 KALRN-014 protein_coding Homo_sapiens 0 2013
ENST00000471431 KALRN-017 retained_intron Homo_sapiens 0 219

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