C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kalirin, RhoGEF kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354186 KALRN-004 ENSG00000160145 9606 + 3:124227990-124721189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverLungMuscleOvaryTestisENST00000354186
Transcript ID Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000354186 0.763±0.00 0.570±0.00 0.681±0.23 0.468±0.00 0.358±0.00 0.492±0.00 0.599±0.26 0.473±0.11 0.792±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076810 Kalrn-011 protein_coding Mus_musculus 0 11850
ENSMUST00000142817 Kalrn-009 protein_coding Mus_musculus 0 9485
ENSMUST00000114961 Kalrn-012 protein_coding Mus_musculus 0 7457
ENSMUST00000114960 Kalrn-001 protein_coding Mus_musculus 0 6565
ENSMUST00000089655 Kalrn-004 protein_coding Mus_musculus 0 6445
ENSMUST00000114973 Kalrn-015 protein_coding Mus_musculus 0 5145
ENSMUST00000114949 Kalrn-003 protein_coding Mus_musculus 0 4200
ENSMUST00000114953 Kalrn-005 protein_coding Mus_musculus 0 4080
ENSMUST00000114954 Kalrn-007 protein_coding Mus_musculus 0 4074
ENSMUST00000151491 Kalrn-002 protein_coding Mus_musculus 0 3395
ENSMUST00000114947 Kalrn-018 protein_coding Mus_musculus 0 2708
ENSMUST00000114966 Kalrn-013 protein_coding Mus_musculus 0 2639
ENSMUST00000114963 Kalrn-010 protein_coding Mus_musculus 0 2037
ENSMUST00000114964 Kalrn-014 protein_coding Mus_musculus 0 2032
ENSMUST00000137216 Kalrn-006 retained_intron Mus_musculus 0 1526
ENSMUST00000090247 Trio-201 protein_coding Mus_musculus 0 1513
ENSDART00000114042 kalrna-201 protein_coding Danio_rerio 0 1469
ENSDART00000087055 trioa-201 protein_coding Danio_rerio 0 1404
ENSDART00000144275 trioa-001 protein_coding Danio_rerio 0 1404
ENSDART00000000382 triob-201 protein_coding Danio_rerio 0 1092
ENSMUST00000132002 Kalrn-016 retained_intron Mus_musculus 0 1081
ENSDART00000153785 triob-001 protein_coding Danio_rerio 0 562
ENSMUST00000156668 Kalrn-017 processed_transcript Mus_musculus 0 481
ENSMUST00000124430 Kalrn-019 processed_transcript Mus_musculus 1e-26 128

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