C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nuclear respiratory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115209 Nrf1-006 ENSMUSG00000058440 10090 + 6:30048067-30152518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonMuscleENSMUST00000115209
Transcript ID Breast Colon Muscle
ENSMUST00000115209 3.279±0.00 4.743±0.00 0.591±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YF CIL_0001YF_0002 CGP 6:30047988-30304539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007005 IMP mitochondrion organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223190 NRF1-001 protein_coding Homo_sapiens 0 2824
ENST00000311967 NRF1-002 protein_coding Homo_sapiens 0 1965
ENST00000353868 NRF1-201 protein_coding Homo_sapiens 0 1897
ENST00000393230 NRF1-003 protein_coding Homo_sapiens 0 2754
ENST00000393232 NRF1-202 protein_coding Homo_sapiens 0 2837
ENST00000454688 NRF1-005 protein_coding Homo_sapiens 0 883
ENST00000477428 NRF1-004 processed_transcript Homo_sapiens 9e-16 88

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